Factsheet for Os12t0193100-03

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5A01G121400.1	Wheat	nucleus	74.44	71.69
TraesCS5B01G113500.2	Wheat	nucleus	74.12	71.38
TraesCS5D01G118100.2	Wheat	nucleus	73.48	70.77
OQU78707	Sorghum	nucleus	65.81	59.03
KXG23194	Sorghum	nucleus	65.5	58.57
Zm00001d044699_P002	Maize	nucleus	61.98	55.43
GSMUA_Achr8P21750_001	Banana	nucleus	44.41	49.64
KRH10004	Soybean	mitochondrion	38.98	42.21
GSMUA_Achr10P...	Banana	cytosol	41.21	42.16
PGSC0003DMT400006407	Potato	mitochondrion, nucleus	37.06	41.73
Solyc03g121500.2.1	Tomato	cytosol, nucleus	32.91	41.2
CDY24052	Canola	nucleus	34.82	40.07
CDY33066	Canola	nucleus	34.82	40.07
AT1G55170.1	Thale cress	nucleus	35.78	39.58
Bra037981.1-P	Field mustard	nucleus	34.19	39.34
KRH23325	Soybean	nucleus	39.3	37.39
VIT_09s0002g02070.t01	Wine grape	mitochondrion	41.21	35.44
Os08t0430100-01	Rice	mitochondrion	29.71	34.7
Bra014359.1-P	Field mustard	nucleus	29.71	28.35
CDY08227	Canola	nucleus	29.71	28.35
Os02t0192100-01	Rice	mitochondrion	20.77	26.0
Os07t0508200-01	Rice	cytosol, mitochondrion, nucleus, plastid	28.43	25.0
Os03t0818000-00	Rice	mitochondrion	24.6	20.64
Os04t0479100-01	Rice	cytosol	21.73	16.75

Protein Annotations

EMBL:AK068584	EMBL:AK072237	EMBL:AK101295	EnsemblPlants:Os12t0193100-03	EnsemblPlantsGene:Os12g0193100	EntrezGene:4351708
ncoils:Coil	PANTHER:PTHR33405	PANTHER:PTHR33405:SF14	ProteinID:ABA96059.1	ProteinID:ABG21904.1	ProteinID:BAT16221.1
RefSeq:XP_015620404.1	RefSeq:XP_015620406.1	RefSeq:XP_015620407.1	SEG:seg	UniParc:UPI00006818BF	UniProt:Q2QWJ9
MapMan:35.1	:	:	:	:	:

Description

Similar to cDNA clone:J013157P20, full insert sequence. (Os12t0193100-01);Similar to cDNA clone:J013157P20, full insert sequence. (Os12t0193100-02);Similar to cDNA clone:J013157P20, full insert sequence. (Os12t0193100-03);Similar to cDNA clone:J013157P20, full insert sequence. (Os12t0193100-04)

Coordinates

chr12:-:4749643..4760787

Molecular Weight (calculated)

35996.8 Da

IEP (calculated)

6.858

GRAVY (calculated)

-0.836

Length

313 amino acids

Sequence
(BLAST)

001: MSGRDRLPRR FIEDGRGYPD IRVVDERRGY PDIRVVEDRR GYHGIRAIED HRGYPDIHEG LVMRVAPRSH TAMPEEEIEI QGAEFRRLMA DHRALAEERL
101: ALHRELQAGK DEVRHLNTII ADISAKKETY IGELVDKRRK LEAELRANES LRDEIVQLRG EIDKHLVVRK ELSAKSASIM HELTREQSNK QQIPMLKAEI
201: DALRQELVHA RSACELEQKG NFQLVEQKKA MEKNMISMAQ EIEQMRAELA NSEGRPWAPG ATYGMKLGSP EVTFPTSYGD NYNIHVGGSE KGHSHLPESS
301: SWGTYDNNRL QYR

Best Arabidopsis Sequence Match ( AT1G55170.1 )
(BLAST)

001: MSGRNRIHRD IRDSYHDHRD LPPERPFLRG PPLLQPPPPS LLEDLQIQEG EIRRQDAEIR RLLSDNHGLA DDRMVLEREL VAAKEELHRM NLMISDLRAE
101: QDLQLREFSE KRHKLEGDVR AMESYKKEAS QLRGEVQKLD EIKRELSGNV QLLRKDLAKL QSDNKQIPGM RAEVKDLQKE LMHARDAIEY EKKEKFELME
201: QRQTMEKNMV SMAREVEKLR AELATVDSRP WGFGGSYGMN YNNMDGTFRG SYGENDTYLG SSERSQYYSH GSGSQKKPRL DRH

Arabidopsis Description

FLXL3Protein FLX-like 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9C717]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.