Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY33066 | Canola | nucleus | 81.98 | 85.29 |
| CDY24052 | Canola | nucleus | 81.63 | 84.93 |
| Bra037981.1-P | Field mustard | nucleus | 81.27 | 84.56 |
| Bra014359.1-P | Field mustard | nucleus | 61.13 | 52.74 |
| CDY08227 | Canola | nucleus | 60.07 | 51.83 |
| Solyc03g121500.2.1 | Tomato | cytosol, nucleus | 44.88 | 50.8 |
| PGSC0003DMT400006407 | Potato | mitochondrion, nucleus | 49.47 | 50.36 |
| KRH10004 | Soybean | mitochondrion | 49.47 | 48.44 |
| GSMUA_Achr8P21750_001 | Banana | nucleus | 47.35 | 47.86 |
| KRH23325 | Soybean | nucleus | 50.18 | 43.16 |
| VIT_09s0002g02070.t01 | Wine grape | mitochondrion | 53.71 | 41.76 |
| GSMUA_Achr10P... | Banana | cytosol | 44.17 | 40.85 |
| Os12t0193100-03 | Rice | nucleus | 39.58 | 35.78 |
| TraesCS5D01G118100.2 | Wheat | nucleus | 39.93 | 34.77 |
| TraesCS5B01G113500.2 | Wheat | nucleus | 39.93 | 34.77 |
| TraesCS5A01G121400.1 | Wheat | nucleus | 39.58 | 34.46 |
| KXG23194 | Sorghum | nucleus | 37.81 | 30.57 |
| OQU78707 | Sorghum | nucleus | 36.75 | 29.8 |
| AT3G14750.1 | Thale cress | nucleus, plastid | 32.86 | 28.1 |
| Zm00001d044699_P002 | Maize | nucleus | 34.28 | 27.71 |
| AT5G61920.1 | Thale cress | cytosol, mitochondrion, nucleus, plastid | 21.2 | 25.21 |
| AT2G30120.5 | Thale cress | plastid | 23.67 | 22.79 |
| AT1G67170.1 | Thale cress | nucleus | 26.15 | 20.61 |
Protein Annotations
| MapMan:35.1 | EntrezGene:841960 | UniProt:A0A178W869 | ProteinID:AAG50834.1 | ProteinID:AAG51576.1 | ProteinID:AEE33197.1 |
| EMBL:AK118721 | ArrayExpress:AT1G55170 | EnsemblPlantsGene:AT1G55170 | RefSeq:AT1G55170 | TAIR:AT1G55170 | RefSeq:AT1G55170-TAIR-G |
| EnsemblPlants:AT1G55170.1 | TAIR:AT1G55170.1 | EMBL:AY084916 | EMBL:BT006117 | ncoils:Coil | GO:GO:0000003 |
| GO:GO:0003674 | GO:GO:0007275 | GO:GO:0008150 | GO:GO:0009791 | GO:GO:0009908 | GO:GO:0009987 |
| GO:GO:0030154 | RefSeq:NP_564678.1 | ProteinID:OAP13262.1 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 |
| PO:PO:0000293 | PO:PO:0001016 | PO:PO:0001017 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 |
| PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 |
| PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 |
| PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 |
| PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 |
| PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025195 | PO:PO:0025281 |
| PANTHER:PTHR33405 | PANTHER:PTHR33405:SF2 | UniProt:Q9C717 | UniParc:UPI00000AC704 | SEG:seg | : |
Description
FLXL3Protein FLX-like 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9C717]
Coordinates
chr1:+:20580274..20581975
Molecular Weight (calculated)
33103.3 Da
IEP (calculated)
7.047
GRAVY (calculated)
-1.093
Length
283 amino acids
Sequence
(BLAST)
(BLAST)
001: MSGRNRIHRD IRDSYHDHRD LPPERPFLRG PPLLQPPPPS LLEDLQIQEG EIRRQDAEIR RLLSDNHGLA DDRMVLEREL VAAKEELHRM NLMISDLRAE
101: QDLQLREFSE KRHKLEGDVR AMESYKKEAS QLRGEVQKLD EIKRELSGNV QLLRKDLAKL QSDNKQIPGM RAEVKDLQKE LMHARDAIEY EKKEKFELME
201: QRQTMEKNMV SMAREVEKLR AELATVDSRP WGFGGSYGMN YNNMDGTFRG SYGENDTYLG SSERSQYYSH GSGSQKKPRL DRH
101: QDLQLREFSE KRHKLEGDVR AMESYKKEAS QLRGEVQKLD EIKRELSGNV QLLRKDLAKL QSDNKQIPGM RAEVKDLQKE LMHARDAIEY EKKEKFELME
201: QRQTMEKNMV SMAREVEKLR AELATVDSRP WGFGGSYGMN YNNMDGTFRG SYGENDTYLG SSERSQYYSH GSGSQKKPRL DRH
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.