Factsheet for Os04t0479100-01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
mitochondrion 3
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6D01G330600.1	Wheat	mitochondrion	71.92	65.91
TraesCS6A01G347500.1	Wheat	mitochondrion	71.67	64.24
OQU81803	Sorghum	nucleus, plastid	68.72	62.98
TraesCS6B01G381000.1	Wheat	mitochondrion	71.43	62.77
Zm00001d025689_P002	Maize	cytosol	70.94	60.13
Zm00001d003291_P002	Maize	mitochondrion, plastid	68.72	54.39
VIT_14s0030g01830.t01	Wine grape	cytosol, mitochondrion	31.28	41.78
GSMUA_Achr6P28060_001	Banana	mitochondrion	32.51	41.51
KRH18932	Soybean	mitochondrion	24.38	35.48
Bra010043.1-P	Field mustard	nucleus, peroxisome, plasma membrane, plastid	16.5	32.06
Os02t0192100-01	Rice	mitochondrion	19.7	32.0
PGSC0003DMT400029024	Potato	mitochondrion	24.38	31.83
CDY00237	Canola	mitochondrion	17.0	30.67
CDX86949	Canola	mitochondrion, nucleus, peroxisome, plastid	17.0	30.4
Solyc07g006260.2.1	Tomato	mitochondrion, nucleus	23.15	30.23
AT5G61920.1	Thale cress	cytosol, mitochondrion, nucleus, plastid	16.26	27.73
Os08t0430100-01	Rice	mitochondrion	16.01	24.25
Os07t0508200-01	Rice	cytosol, mitochondrion, nucleus, plastid	21.18	24.16
Os12t0193100-03	Rice	nucleus	16.75	21.73
Os03t0818000-00	Rice	mitochondrion	19.95	21.72

Protein Annotations

EMBL:AK071348	EnsemblPlants:Os04t0479100-01	EnsemblPlantsGene:Os04g0479100	EntrezGene:4336168	GO:GO:0003674	GO:GO:0003810
GO:GO:0003824	GO:GO:0016740	GO:GO:0016746	ncoils:Coil	PANTHER:PTHR33405	PANTHER:PTHR33405:SF4
ProteinID:BAF15006.1	ProteinID:BAS89716.1	ProteinID:CAE05879.3	ProteinID:EAZ31099.1	RefSeq:XP_015637287.1	SEG:seg
UniParc:UPI00001B1CD1	UniProt:Q7XK24	MapMan:35.1	:	:	:

Description

transglutaminase, TgaseSimilar to OSIGBa0116M22.10 protein. (Os04t0479100-01);Similar to OSIGBa0116M22.10 protein. (Os04t0479100-02)

Coordinates

chr4:-:23960070..23963329

Molecular Weight (calculated)

43558.3 Da

IEP (calculated)

6.658

GRAVY (calculated)

-0.457

Length

406 amino acids

Sequence
(BLAST)

001: MAYHGQLDGR QASGLMRDGA FPAASLSGRQ PLDRAATALE ILEKKLAEQT AEAEKLIREN QRLASSHVVL RQDIVDTEKE MQMIRAHLGD VQTETDMHMR
101: DLMERMRLME ADIQAGDAVK KELHQVHMEA KRLIAERQML TVEMDKVTKE LHKFSGDSKK LPELLTELDG LRKEHQSLRS AFEYEKNTNI KQVEQMRTME
201: MNLMTMTKEA DKLRADVANA EKRAQVAAAQ AVAAQAGVAH VTASQPGAAQ AVAVPAASNP YSSAFTGHPS AYHQGATQAG VYQQGTTQAG AYQQGSTQAG
301: AYAYPTYDAA TAYQMHAAQA NAYAGYPGYP VAGYTQAALP GYPSAYAAPQ QPISSGVATD VASMYGAISS AGYPAGVVQS SSGAANAGQA PATYPVAYDP
401: TRAGQR

Best Arabidopsis Sequence Match ( AT1G67170.1 )
(BLAST)

001: MESKGRIHPS HHHMRRPLPG PGGCIAHPET FGNHGAIPPS AAQGVYPSFN MLPPPEVMEQ KFVAQHGELQ RLAIENQRLG GTHGSLRQEL AAAQHEIQML
101: HAQIGSMKSE REQRMMGLAE KVAKMETELQ KSEAVKLEMQ QARAEARSLV VAREELMSKV HQLTQELQKS RSDVQQIPAL MSELENLRQE YQQCRATYDY
201: EKKFYNDHLE SLQAMEKNYM TMAREVEKLQ AQLMNNANSD RRAGGPYGNN INAEIDASGH QSGNGYYEDA FGPQGYIPQP VAGNATGPNS VVGAAQYPYQ
301: GVTQPGYFPQ RPGYNFPRGP PGSYDPTTRL PTGPYGAPFP PGPSNNTPYA GTHGNPSRR

Arabidopsis Description

FLXL2Protein FLX-like 2 [Source:UniProtKB/Swiss-Prot;Acc:Q84TD8]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.