Factsheet for TraesCS6A01G347500.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 3
nucleus 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	cytosol, mitochondrion, nucleus
MultiLoc:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6D01G330600.1	Wheat	mitochondrion	96.03	98.19
TraesCS6B01G381000.1	Wheat	mitochondrion	97.57	95.67
Os04t0479100-01	Rice	cytosol	64.24	71.67
OQU81803	Sorghum	nucleus, plastid	66.89	68.4
Zm00001d025689_P002	Maize	cytosol	67.99	64.3
Zm00001d003291_P002	Maize	mitochondrion, plastid	67.11	59.26
VIT_14s0030g01830.t01	Wine grape	cytosol, mitochondrion	27.37	40.79
GSMUA_Achr6P28060_001	Banana	mitochondrion	25.83	36.79
KRH18932	Soybean	mitochondrion	22.3	36.2
Bra010043.1-P	Field mustard	nucleus, peroxisome, plasma membrane, plastid	15.23	33.01
CDY00237	Canola	mitochondrion	15.67	31.56
CDX86949	Canola	mitochondrion, nucleus, peroxisome, plastid	15.67	31.28
PGSC0003DMT400029024	Potato	mitochondrion	20.97	30.55
Solyc07g006260.2.1	Tomato	mitochondrion, nucleus	19.43	28.3
AT5G61920.1	Thale cress	cytosol, mitochondrion, nucleus, plastid	14.79	28.15
TraesCS2A01G226300.1	Wheat	nucleus	18.1	23.7
TraesCS3A01G524600.1	Wheat	nucleus	13.69	23.22
TraesCS3A01G526000.1	Wheat	nucleus	13.69	23.22
TraesCS6A01G169900.1	Wheat	nucleus	22.52	21.84
TraesCS5A01G473300.1	Wheat	cytosol, mitochondrion, nucleus	15.89	21.24
TraesCS5A01G121400.1	Wheat	nucleus	13.91	19.38
TraesCS1A01G232900.1	Wheat	nucleus	6.84	19.14

Protein Annotations

EnsemblPlants:TraesCS6A01G347500.1	EnsemblPlantsGene:TraesCS6A01G347500	ncoils:Coil	PANTHER:PTHR33405	PANTHER:PTHR33405:SF4	SEG:seg
MapMan:35.1	:	:	:	:	:

Description

No Description!

Coordinates

chr6A:-:579952353..579955099

Molecular Weight (calculated)

48119.6 Da

IEP (calculated)

6.275

GRAVY (calculated)

-0.634

Length

453 amino acids

Sequence
(BLAST)

001: MAHRGHLDGL MRHGAFSGAG LSGRQPLEPS PATILEILEN KLAVQTAEAE KLIRENQRLA DSHAALRKDI IDTETEMQMI RTHLGDVQVE TDMHMRDLVE
101: RIRLMEADIQ AGDAVKKELH QVHMEAKRLI TERQMLTNDL EAATKELQKY SGDNSNLTEL VAELDGLRKE HHSLRSAFEY EKNTNIKQVE QMRTMEMNLI
201: TMTKEADKLR ADLANAANRA HAAQVTPPQP GTGQAAAASA ATNPYASAYT SHPSAYQQGT SQAAAYQQGT AQAAAYQQGT PQPAAYQQGT PQSAAYQQGA
301: PQSAAYQQGA PQSAAYQQGA PQAGAYQQGA PQAGAYQQGA PQAGAYQQGT YGYPTAYDSA TAYQLHANAY ASYSGYPVAG YAQPSYPGTY AAPQQHPVAS
401: GAATDTTSVY GAAGSTGYPA APVQASSGAA NAGQAAPPAS YPATYDPTKA AQR

Best Arabidopsis Sequence Match ( AT1G67170.1 )
(BLAST)

001: MESKGRIHPS HHHMRRPLPG PGGCIAHPET FGNHGAIPPS AAQGVYPSFN MLPPPEVMEQ KFVAQHGELQ RLAIENQRLG GTHGSLRQEL AAAQHEIQML
101: HAQIGSMKSE REQRMMGLAE KVAKMETELQ KSEAVKLEMQ QARAEARSLV VAREELMSKV HQLTQELQKS RSDVQQIPAL MSELENLRQE YQQCRATYDY
201: EKKFYNDHLE SLQAMEKNYM TMAREVEKLQ AQLMNNANSD RRAGGPYGNN INAEIDASGH QSGNGYYEDA FGPQGYIPQP VAGNATGPNS VVGAAQYPYQ
301: GVTQPGYFPQ RPGYNFPRGP PGSYDPTTRL PTGPYGAPFP PGPSNNTPYA GTHGNPSRR

Arabidopsis Description

FLXL2Protein FLX-like 2 [Source:UniProtKB/Swiss-Prot;Acc:Q84TD8]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.