CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 2
mitochondrion 4
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra010043.1-P	Field mustard	nucleus, peroxisome, plasma membrane, plastid	91.56	98.56
CDX86949	Canola	mitochondrion, nucleus, peroxisome, plastid	97.78	96.92
AT5G61920.1	Thale cress	cytosol, mitochondrion, nucleus, plastid	77.78	73.53
KRH18932	Soybean	mitochondrion	36.44	29.39
VIT_14s0030g01830.t01	Wine grape	cytosol, mitochondrion	38.22	28.29
Solyc07g006260.2.1	Tomato	mitochondrion, nucleus	35.56	25.72
PGSC0003DMT400029024	Potato	mitochondrion	35.11	25.4
CDY33066	Canola	nucleus	28.0	23.16
GSMUA_Achr6P28060_001	Banana	mitochondrion	32.44	22.96
CDY24052	Canola	nucleus	27.56	22.79
CDY10713	Canola	mitochondrion	27.11	21.94
CDY51010	Canola	nucleus	26.22	21.22
CDX98491	Canola	cytosol, mitochondrion, nucleus, peroxisome	28.0	19.38
CDY12623	Canola	nucleus	27.11	19.24
CDX97599	Canola	cytosol, mitochondrion, nucleus, peroxisome	27.11	18.83
Os04t0479100-01	Rice	cytosol	30.67	17.0
CDX96108	Canola	cytosol, mitochondrion, nucleus, plastid	25.78	16.86
OQU81803	Sorghum	nucleus, plastid	32.89	16.7
CDY01786	Canola	cytosol	24.89	16.09
TraesCS6A01G347500.1	Wheat	mitochondrion	31.56	15.67
TraesCS6D01G330600.1	Wheat	mitochondrion	30.67	15.58
CDY08227	Canola	nucleus	22.67	15.55
Zm00001d025689_P002	Maize	cytosol	32.89	15.45
TraesCS6B01G381000.1	Wheat	mitochondrion	31.11	15.15
Zm00001d003291_P002	Maize	mitochondrion, plastid	33.33	14.62
CDY54119	Canola	mitochondrion	20.0	12.33

Protein Annotations

EnsemblPlants:CDY00237	EnsemblPlantsGene:GSBRNA2T00109786001	ncoils:Coil	PANTHER:PTHR33405	PANTHER:PTHR33405:SF4	ProteinID:CDY00237
ProteinID:CDY00237.1	SEG:seg	UniParc:UPI0004EDB16D	MapMan:35.1	:	:

Description

BnaA06g21380D

Coordinates

chrLK031917:+:327201..328062

Molecular Weight (calculated)

25209.8 Da

IEP (calculated)

7.038

GRAVY (calculated)

-0.701

Length

225 amino acids

Sequence
(BLAST)

001: MSSRERLGSS KHYSRGMSSS SSRHHETISS ASDHRVSHSD VLENKIAARA AEIDRLSSDN RKLAASYVAL KEDLALADRE VQGLRAHIVK TETDGEIQIR
101: GALEKIAKLE GIVNNRDNIR RELQSAHIEA HTLAREREEL AAQVKAAVKE LKKVCLESEG LESSVQELER LKEEHQRLSR EEFDAEKIEN VGKLEQLKEM
201: ESNIIGAVKA IEKLRSEIAT ARSRA

Best Arabidopsis Sequence Match ( AT5G61920.3 )
(BLAST)

001: MSSRERIGSN HHSRVSQGMS TSGSSSSRHH DTISSTSDPR HLRDHQISLS DILENKIAVQ AAEIDRLSND NRKLASSYVA LKEDLTVADR EVQGLRAHIR
101: KTETDHEIQI RSTLEKIAKM EGMVKNRENI RREVQSAHIE AHRLAREREE LASKVKLGMK DLKKVCLEAE SLEASSQELE RLKEEHQRLR KEFEEEKSGN
201: VEKLAQLKGM ERKIIGAVKA IEKLRSEIST ARNKAVEN

Arabidopsis Description

FLXL4FLX4 [Source:UniProtKB/TrEMBL;Acc:A0A178USJ6]
SUBAcon: [mitochondrion,plastid,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.