Subcellular Localization
min:
: max
Winner_takes_all: plastid, nucleus, peroxisome, plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 3
- peroxisome 1
- plastid 2
- plasma membrane 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY00237 | Canola | mitochondrion | 98.56 | 91.56 |
| CDX86949 | Canola | mitochondrion, nucleus, peroxisome, plastid | 99.04 | 91.19 |
| AT5G61920.1 | Thale cress | cytosol, mitochondrion, nucleus, plastid | 79.43 | 69.75 |
| KRH18932 | Soybean | mitochondrion | 39.71 | 29.75 |
| VIT_14s0030g01830.t01 | Wine grape | cytosol, mitochondrion | 39.71 | 27.3 |
| Solyc07g006260.2.1 | Tomato | mitochondrion, nucleus | 36.84 | 24.76 |
| PGSC0003DMT400029024 | Potato | mitochondrion | 36.36 | 24.44 |
| GSMUA_Achr6P28060_001 | Banana | mitochondrion | 33.97 | 22.33 |
| Bra037981.1-P | Field mustard | nucleus | 27.75 | 21.32 |
| Bra018336.1-P | Field mustard | nucleus | 26.79 | 20.14 |
| Bra034018.1-P | Field mustard | nucleus | 28.71 | 19.61 |
| Bra027313.1-P | Field mustard | cytosol, mitochondrion, nucleus, peroxisome | 28.23 | 17.88 |
| Bra027315.1-P | Field mustard | cytosol, mitochondrion, nucleus, peroxisome | 28.23 | 17.77 |
| Bra004207.1-P | Field mustard | nucleus | 27.27 | 16.57 |
| Os04t0479100-01 | Rice | cytosol | 32.06 | 16.5 |
| OQU81803 | Sorghum | nucleus, plastid | 33.97 | 16.03 |
| Bra014359.1-P | Field mustard | nucleus | 24.4 | 15.55 |
| TraesCS6A01G347500.1 | Wheat | mitochondrion | 33.01 | 15.23 |
| TraesCS6D01G330600.1 | Wheat | mitochondrion | 32.06 | 15.12 |
| Zm00001d025689_P002 | Maize | cytosol | 33.97 | 14.82 |
| TraesCS6B01G381000.1 | Wheat | mitochondrion | 32.54 | 14.72 |
| Zm00001d003291_P002 | Maize | mitochondrion, plastid | 34.45 | 14.04 |
Protein Annotations
Description
AT5G61920 (E=3e-079) | unknown protein
Coordinates
chrA06:+:18806271..18806979
Molecular Weight (calculated)
23462.7 Da
IEP (calculated)
6.526
GRAVY (calculated)
-0.683
Length
209 amino acids
Sequence
(BLAST)
(BLAST)
001: MSSSSSSRHH ETISSASDHR VSHSDVLENK IAARAAEIDR LSSDNRKLAA SYVALKEDLA LADREVQGLR AHIVKTETDG EIQIRGALEK IAKLEGIVNN
101: RDNIRRELQS AHIEAHTLAR EREELAAQVK AAVKELKKVC LESEGLESSV QELERLKEEH QRLREEFDAE KSRNVEKLEQ LKEMESNIIG AVKAIEKLRS
201: EIATARSRA
101: RDNIRRELQS AHIEAHTLAR EREELAAQVK AAVKELKKVC LESEGLESSV QELERLKEEH QRLREEFDAE KSRNVEKLEQ LKEMESNIIG AVKAIEKLRS
201: EIATARSRA
001: MSSRERIGSN HHSRVSQGMS TSGSSSSRHH DTISSTSDPR HLRDHQISLS DILENKIAVQ AAEIDRLSND NRKLASSYVA LKEDLTVADR EVQGLRAHIR
101: KTETDHEIQI RSTLEKIAKM EGMVKNRENI RREVQSAHIE AHRLAREREE LASKVKLGMK DLKKVCLEAE SLEASSQELE RLKEEHQRLR KEFEEEKSGN
201: VEKLAQLKGM ERKIIGAVKA IEKLRSEIST ARNKAVEN
101: KTETDHEIQI RSTLEKIAKM EGMVKNRENI RREVQSAHIE AHRLAREREE LASKVKLGMK DLKKVCLEAE SLEASSQELE RLKEEHQRLR KEFEEEKSGN
201: VEKLAQLKGM ERKIIGAVKA IEKLRSEIST ARNKAVEN
Arabidopsis Description
FLXL4FLX4 [Source:UniProtKB/TrEMBL;Acc:A0A178USJ6]
SUBAcon: [plastid,cytosol,nucleus,mitochondrion]
SUBAcon: [plastid,cytosol,nucleus,mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.