Factsheet for TraesCS6B01G381000.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion
MultiLoc:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6D01G330600.1	Wheat	mitochondrion	93.72	97.74
TraesCS6A01G347500.1	Wheat	mitochondrion	95.67	97.57
Os04t0479100-01	Rice	cytosol	62.77	71.43
OQU81803	Sorghum	nucleus, plastid	65.58	68.4
Zm00001d025689_P002	Maize	cytosol	66.67	64.3
Zm00001d003291_P002	Maize	mitochondrion, plastid	65.8	59.26
VIT_14s0030g01830.t01	Wine grape	cytosol, mitochondrion	26.62	40.46
GSMUA_Achr6P28060_001	Banana	mitochondrion	25.11	36.48
KRH18932	Soybean	mitochondrion	21.64	35.84
Bra010043.1-P	Field mustard	nucleus, peroxisome, plasma membrane, plastid	14.72	32.54
CDY00237	Canola	mitochondrion	15.15	31.11
CDX86949	Canola	mitochondrion, nucleus, peroxisome, plastid	15.15	30.84
PGSC0003DMT400029024	Potato	mitochondrion	20.35	30.23
Solyc07g006260.2.1	Tomato	mitochondrion, nucleus	19.05	28.3
AT5G61920.1	Thale cress	cytosol, mitochondrion, nucleus, plastid	14.5	28.15
TraesCS1B01G246000.1	Wheat	nucleus	13.85	24.15
TraesCS3B01G593200.1	Wheat	nucleus	13.85	23.97
TraesCS1B01G180300.1	Wheat	nucleus	13.64	23.77
TraesCS3B01G591900.1	Wheat	nucleus	13.42	23.22
TraesCS6B01G198100.1	Wheat	extracellular, mitochondrion, nucleus, plastid	22.94	22.36
TraesCS2B01G249600.3	Wheat	plastid	17.53	21.83
TraesCS5B01G486200.1	Wheat	cytosol, mitochondrion, nucleus	15.8	21.66
TraesCS5B01G113500.2	Wheat	nucleus	13.2	18.77

Protein Annotations

EnsemblPlants:TraesCS6B01G381000.1	EnsemblPlantsGene:TraesCS6B01G381000	ncoils:Coil	PANTHER:PTHR33405	PANTHER:PTHR33405:SF4	SEG:seg
MapMan:35.1	:	:	:	:	:

Description

No Description!

Coordinates

chr6B:-:656030166..656032984

Molecular Weight (calculated)

48994.5 Da

IEP (calculated)

6.275

GRAVY (calculated)

-0.648

Length

462 amino acids

Sequence
(BLAST)

001: MAHRGHLDGL MRHGAFSGAG LSGRQPLEPS PATILEILEN KLAVQTAEAE KLIRENQRLA DSHAALRKDI IDTETEMQMI RTHLGDVQVE TDMHMRDLVE
101: RIRLMEADIQ AGDAVKKELH QVHMEAKRLI TERQMLTNDL EATTKELQKY SGDNSNLTEL VAELDGLRKE HHSLRSAFEY EKNTNIKQVE QMRTMEMNLI
201: TMTKEADKLR ADLANAANRA HAAQVTPPQP GTGQAAAASA ATNPYASAYT SHPSAYQQGT SQAAAYQQGT AQAAAYQQGN PQSAAYQQGA PQSAAYQQGA
301: PQSAAYQQGA XQAAAYQQGT PQAAAYQQGA PQAGAYQQGA PQAGAYQQGA PQAGAYQQGT YGYPTAYDSA TAYQLHANAY ASYSGYPVAG YAQPSYPGTY
401: AAPQQHPVAS GVATDTTSAY GAAGSTGYPA APVQASSGTN AGQAAPPAPY PATYDPTKAA QR

Best Arabidopsis Sequence Match ( AT1G67170.1 )
(BLAST)

001: MESKGRIHPS HHHMRRPLPG PGGCIAHPET FGNHGAIPPS AAQGVYPSFN MLPPPEVMEQ KFVAQHGELQ RLAIENQRLG GTHGSLRQEL AAAQHEIQML
101: HAQIGSMKSE REQRMMGLAE KVAKMETELQ KSEAVKLEMQ QARAEARSLV VAREELMSKV HQLTQELQKS RSDVQQIPAL MSELENLRQE YQQCRATYDY
201: EKKFYNDHLE SLQAMEKNYM TMAREVEKLQ AQLMNNANSD RRAGGPYGNN INAEIDASGH QSGNGYYEDA FGPQGYIPQP VAGNATGPNS VVGAAQYPYQ
301: GVTQPGYFPQ RPGYNFPRGP PGSYDPTTRL PTGPYGAPFP PGPSNNTPYA GTHGNPSRR

Arabidopsis Description

FLXL2Protein FLX-like 2 [Source:UniProtKB/Swiss-Prot;Acc:Q84TD8]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.