CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
mitochondrion 5
nucleus 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_14s0030g01830.t01	Wine grape	cytosol, mitochondrion	53.05	48.68
Bra010043.1-P	Field mustard	nucleus, peroxisome, plasma membrane, plastid	29.75	39.71
PGSC0003DMT400029024	Potato	mitochondrion	41.58	37.3
GSMUA_Achr6P28060_001	Banana	mitochondrion	42.29	37.11
CDX86949	Canola	mitochondrion, nucleus, peroxisome, plastid	29.75	36.56
CDY00237	Canola	mitochondrion	29.39	36.44
Solyc07g006260.2.1	Tomato	mitochondrion, nucleus	38.71	34.73
AT5G61920.1	Thale cress	cytosol, mitochondrion, nucleus, plastid	28.67	33.61
KRH10004	Soybean	mitochondrion	26.16	25.26
KRH43428	Soybean	endoplasmic reticulum	29.75	25.23
KRH13877	Soybean	nucleus	29.03	25.0
KRH17098	Soybean	plastid	25.09	24.65
Os04t0479100-01	Rice	cytosol	35.48	24.38
KRG92122	Soybean	plastid	11.83	23.74
KRH23325	Soybean	nucleus	27.24	23.1
KRH72743	Soybean	mitochondrion	24.37	22.97
TraesCS6D01G330600.1	Wheat	mitochondrion	36.2	22.8
KRH01477	Soybean	nucleus	32.97	22.77
OQU81803	Sorghum	nucleus, plastid	35.84	22.57
TraesCS6A01G347500.1	Wheat	mitochondrion	36.2	22.3
TraesCS6B01G381000.1	Wheat	mitochondrion	35.84	21.64
Zm00001d025689_P002	Maize	cytosol	35.13	20.46
Zm00001d003291_P002	Maize	mitochondrion, plastid	34.41	18.71

Protein Annotations

EMBL:ACUP02008148	EnsemblPlants:KRH18932	EnsemblPlantsGene:GLYMA_13G090800	EntrezGene:100306667	ncoils:Coil	PANTHER:PTHR33405
PANTHER:PTHR33405:SF4	ProteinID:KRH18932	ProteinID:KRH18932.1	UniParc:UPI00023D14DE	UniProt:I1LVX3	MapMan:35.1

Description

hypothetical protein

Coordinates

chr13:+:20564703..20567937

Molecular Weight (calculated)

30277.0 Da

IEP (calculated)

8.018

GRAVY (calculated)

-0.416

Length

279 amino acids

Sequence
(BLAST)

001: MMRRGSGLGS AASHRSRESL PLPQLLENKI AAQESEIEQL VSDNRGLASG HVALREALVA AAQDVQKLKS HIRSIQTESD IQIRILVDKI SKGEVDIRAS
101: DSVKKDLQKA HIEAQSLAAS RQEVSAQIHR ATQELKKVHG DVKSIPDLQA ELDSLLQEHQ RLRGTFEYEK NKNIELVDYM KAKEKNLIAM AREVEVLRAE
201: ILNAEKRVNA PNLFGAATPG HSSGPFADVY GRVHGQMAAG QVGESMVPVG ESNGVAAINS AGVSGALWSS PYDPSVGRR

Best Arabidopsis Sequence Match ( AT1G67170.1 )
(BLAST)

001: MESKGRIHPS HHHMRRPLPG PGGCIAHPET FGNHGAIPPS AAQGVYPSFN MLPPPEVMEQ KFVAQHGELQ RLAIENQRLG GTHGSLRQEL AAAQHEIQML
101: HAQIGSMKSE REQRMMGLAE KVAKMETELQ KSEAVKLEMQ QARAEARSLV VAREELMSKV HQLTQELQKS RSDVQQIPAL MSELENLRQE YQQCRATYDY
201: EKKFYNDHLE SLQAMEKNYM TMAREVEKLQ AQLMNNANSD RRAGGPYGNN INAEIDASGH QSGNGYYEDA FGPQGYIPQP VAGNATGPNS VVGAAQYPYQ
301: GVTQPGYFPQ RPGYNFPRGP PGSYDPTTRL PTGPYGAPFP PGPSNNTPYA GTHGNPSRR

Arabidopsis Description

FLXL2Protein FLX-like 2 [Source:UniProtKB/Swiss-Prot;Acc:Q84TD8]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.