CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 2
mitochondrion 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	mitochondrion
Plant-mPloc:	nucleus
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d012984_P002	Maize	mitochondrion	94.12	94.12
Zm00001d034618_P003	Maize	extracellular, mitochondrion	91.02	92.45
TraesCS5A01G473300.1	Wheat	cytosol, mitochondrion, nucleus	68.42	65.19
TraesCS5B01G486200.1	Wheat	cytosol, mitochondrion, nucleus	67.8	64.99
TraesCS5D01G486000.1	Wheat	mitochondrion	67.18	64.39
HORVU5Hr1G112380.1	Barley	cytosol	68.42	61.73
Os03t0818000-00	Rice	mitochondrion	67.8	58.71
GSMUA_Achr10P...	Banana	mitochondrion	38.7	41.67
KRH17098	Soybean	plastid	36.53	41.55
KRH72743	Soybean	mitochondrion	36.84	40.2
VIT_06s0004g07170.t01	Wine grape	mitochondrion	37.15	38.22
KRG92122	Soybean	plastid	16.41	38.13
KXG36288	Sorghum	mitochondrion	37.15	33.9
Bra018336.1-P	Field mustard	nucleus	28.79	33.45
CDY10713	Canola	mitochondrion	28.79	33.45
CDY51010	Canola	nucleus	27.86	32.37
Solyc09g055700.2.1	Tomato	nucleus	30.34	31.01
AT2G30120.5	Thale cress	plastid	27.55	30.27
EES09236	Sorghum	nucleus	24.15	28.89
OQU78707	Sorghum	nucleus	24.77	22.92
KXG23194	Sorghum	nucleus	23.53	21.71
OQU81803	Sorghum	nucleus, plastid	22.91	16.7
EES06432	Sorghum	mitochondrion	24.77	16.03

Protein Annotations

EnsemblPlants:EER93206	EnsemblPlantsGene:SORBI_3001G038100	EntrezGene:8057381	ncoils:Coil	PANTHER:PTHR33405	PANTHER:PTHR33405:SF6
ProteinID:EER93206	ProteinID:EER93206.1	RefSeq:XP_002466208.1	SEG:seg	unigene:Sbi.8030	UniParc:UPI0001A829ED
UniProt:C5WV47	MapMan:35.1	:	:	:	:

Description

hypothetical protein

Coordinates

chr1:-:2830310..2834726

Molecular Weight (calculated)

34705.6 Da

IEP (calculated)

7.268

GRAVY (calculated)

-0.513

Length

323 amino acids

Sequence
(BLAST)

001: MAARRGPHVI KLHDPNPPLL GRAPGPAAAA VSAPSRDEGI LAQHPRAAPS SASAAHPAFA LIEERLVARD QDIQELLVDN QRFAATHVAL QQQLIAAQHE
101: LRAVSVAATR ARAEREGEVR ALADQAAHIE AEARAVAAAR AEVDQVHADV QVLAAARTDL VNRLQGLREK LAHKKAEASK TDSVRAQIET MRREIQKGRA
201: AVDFEKKAHS DNLEQSKAME KNMISVASEI ERLRGELANA EKGATAVNPV AAVGNSGYAA AYGNSEPTYT GMYGNPDATY TAQAYPDAYS TNQAHMHTGA
301: NSHYMSQPVS YGQYEGQHTN VQR

Best Arabidopsis Sequence Match ( AT3G14750.1 )
(BLAST)

001: MSGRNRGPPP PSMKGGSYSG LQAPVHQPPF VRGLGGGPVP PPPHPSMIDD SREPQFRVDA RGLPPQFSIL EDRLAAQNQD VQGLLADNQR LAATHVALKQ
101: ELEVAQHELQ RIMHYIDSLR AEEEIMMREM YDKSMRSEME LREVDAMRAE IQKIRADIKE FTSGRQELTS QVHLMTQDLA RLTADLQQIP TLTAEIENTK
201: QELQRARAAI DYEKKGYAEN YEHGKIMEHK LVAMARELEK LRAEIANSET SAYANGPVGN PGGVAYGGGY GNPEAGYPVN PYQPNYTMNP AQTGVVGYYP
301: PPYGPQAAWA GGYDPQQQQQ QQPPPQGQGH R

Arabidopsis Description

FLXL1Protein FLX-like 1 [Source:UniProtKB/Swiss-Prot;Acc:Q93V84]
SUBAcon: [nucleus,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.