Factsheet for Zm00001d012984_P002

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

cytosol 1
mitochondrion 3
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	cytosol, mitochondrion, nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER93206	Sorghum	mitochondrion	94.12	94.12
Zm00001d034618_P003	Maize	extracellular, mitochondrion	88.54	89.94
TraesCS5A01G473300.1	Wheat	cytosol, mitochondrion, nucleus	66.87	63.72
TraesCS5B01G486200.1	Wheat	cytosol, mitochondrion, nucleus	66.25	63.5
TraesCS5D01G486000.1	Wheat	mitochondrion	65.33	62.61
HORVU5Hr1G112380.1	Barley	cytosol	66.25	59.78
Os03t0818000-00	Rice	mitochondrion	67.8	58.71
GSMUA_Achr10P...	Banana	mitochondrion	39.01	42.0
KRH17098	Soybean	plastid	36.84	41.9
KRH72743	Soybean	mitochondrion	36.53	39.86
VIT_06s0004g07170.t01	Wine grape	mitochondrion	38.08	39.17
KRG92122	Soybean	plastid	16.41	38.13
Bra018336.1-P	Field mustard	nucleus	28.79	33.45
CDY10713	Canola	mitochondrion	28.79	33.45
CDY51010	Canola	nucleus	27.86	32.37
Zm00001d021587_P002	Maize	mitochondrion	34.67	31.73
Solyc09g055700.2.1	Tomato	nucleus	30.96	31.65
AT2G30120.5	Thale cress	plastid	27.86	30.61
Zm00001d052473_P001	Maize	nucleus	24.46	29.04
Zm00001d004959_P003	Maize	cytosol	23.22	26.04
Zm00001d044699_P002	Maize	nucleus	23.84	22.0
Zm00001d025689_P002	Maize	cytosol	22.29	15.03
Zm00001d003291_P002	Maize	mitochondrion, plastid	20.43	12.87

Protein Annotations

EMBL:BT038910	EMBL:BT042700	EnsemblPlants:Zm00001d012984_P002	EnsemblPlants:Zm00001d012984_T002	EnsemblPlantsGene:Zm00001d012984	EntrezGene:100272540
ncoils:Coil	PANTHER:PTHR33405	PANTHER:PTHR33405:SF6	ProteinID:AQK62052.1	ProteinID:AQK62053.1	SEG:seg
UniParc:UPI00017B7858	UniProt:B4FP72	MapMan:35.1	:	:	:

Description

Protein FLC EXPRESSOR

Coordinates

chr5:+:2827981..2833133

Molecular Weight (calculated)

34901.8 Da

IEP (calculated)

7.232

GRAVY (calculated)

-0.493

Length

323 amino acids

Sequence
(BLAST)

001: MAARRGPHVI KLHDPNPPLL GRAPGTAPAA IPAPSRDEGI LAQHPRAAPS SASASHPAFA LIEERLVARD QDIQELLVDN QRFAATHVAL QQQLIAAQHE
101: LRAVSVAATR ARAEREVEVR ALADQAAHIE AEARAVAAAR AEVDQVHADV QVLVAARTDL VNRLQGLREK LAHKKAEASK TDSVRAQIET MRREIQKGRA
201: AVDFEKKAHS DNLEQSKAME KNMIAVASEI ERLRGELANA EKGATAVNPA AAVGNSGYVA AYGNSEPTYT AMYGNPDATY TAQAYPDAYN TNQAHMHAGA
301: SSYYTSQPFS YGQYESQHTN IQR

Best Arabidopsis Sequence Match ( AT3G14750.1 )
(BLAST)

001: MSGRNRGPPP PSMKGGSYSG LQAPVHQPPF VRGLGGGPVP PPPHPSMIDD SREPQFRVDA RGLPPQFSIL EDRLAAQNQD VQGLLADNQR LAATHVALKQ
101: ELEVAQHELQ RIMHYIDSLR AEEEIMMREM YDKSMRSEME LREVDAMRAE IQKIRADIKE FTSGRQELTS QVHLMTQDLA RLTADLQQIP TLTAEIENTK
201: QELQRARAAI DYEKKGYAEN YEHGKIMEHK LVAMARELEK LRAEIANSET SAYANGPVGN PGGVAYGGGY GNPEAGYPVN PYQPNYTMNP AQTGVVGYYP
301: PPYGPQAAWA GGYDPQQQQQ QQPPPQGQGH R

Arabidopsis Description

FLXL1Protein FLX-like 1 [Source:UniProtKB/Swiss-Prot;Acc:Q93V84]
SUBAcon: [plastid,nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.