Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 7
- endoplasmic reticulum 4
- vacuole 4
- plasma membrane 4
- golgi 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2D01G163100.1 | Wheat | extracellular | 84.5 | 93.56 |
| OQU90314 | Sorghum | extracellular | 48.45 | 55.56 |
| TraesCS2A01G157400.1 | Wheat | extracellular | 51.55 | 55.19 |
| TraesCS2A01G264000.1 | Wheat | extracellular | 39.53 | 44.35 |
| TraesCS6A01G339600.1 | Wheat | extracellular | 39.15 | 44.3 |
| TraesCS3A01G398200.1 | Wheat | endoplasmic reticulum, extracellular, vacuole | 28.68 | 26.15 |
| TraesCS1A01G152800.1 | Wheat | extracellular | 24.81 | 26.12 |
| TraesCS3A01G398300.1 | Wheat | endoplasmic reticulum, extracellular | 25.97 | 25.67 |
| TraesCS1A01G152600.1 | Wheat | unclear | 24.03 | 24.6 |
Protein Annotations
| Gene3D:3.90.730.10 | MapMan:35.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003723 | GO:GO:0003824 |
| GO:GO:0004518 | GO:GO:0005488 | GO:GO:0016787 | GO:GO:0033897 | InterPro:IPR036430 | PFAM:PF00445 |
| ScanProsite:PS00530 | ScanProsite:PS00531 | PANTHER:PTHR11240 | PANTHER:PTHR11240:SF18 | InterPro:RNase_T2-like | InterPro:RNase_T2-like_sf |
| InterPro:RNase_T2_His_AS_1 | InterPro:RNase_T2_His_AS_2 | InterPro:Ribonuclease_T2_eukaryotic | SUPFAM:SSF55895 | SignalP:SignalP-noTM | EnsemblPlantsGene:TraesCS2A01G157300 |
| EnsemblPlants:TraesCS2A01G157300.1 | TIGR:cd01061 | SEG:seg | : | : | : |
Description
No Description!
Coordinates
chr2A:-:103892333..103894087
Molecular Weight (calculated)
28587.8 Da
IEP (calculated)
7.224
GRAVY (calculated)
-0.190
Length
258 amino acids
Sequence
(BLAST)
(BLAST)
001: MRLQICSLAV LLLPLLLASA TDFDFFYHVQ QWPGSFCDTT GGCCFPGNVK PAADFGIHGL WPNYAACRPA GDTNRTRCWP DFCNAGDTFN PSLVRINNRM
101: PLFISRSSLC NLSANALQIS DLRSDMDRNW GTLSCRSNDS TAFWSHEWSR HGTCSNMDQH AYFLAALRYK ARFNLTRILL DAGIAPSEER TYCVGSIRDA
201: IGEATGSAPG IECNRNARNE TQLYQVYQCV DLAGTGPVPC PAVPMQSRCT DQVKFPAF
101: PLFISRSSLC NLSANALQIS DLRSDMDRNW GTLSCRSNDS TAFWSHEWSR HGTCSNMDQH AYFLAALRYK ARFNLTRILL DAGIAPSEER TYCVGSIRDA
201: IGEATGSAPG IECNRNARNE TQLYQVYQCV DLAGTGPVPC PAVPMQSRCT DQVKFPAF
001: MRGIIIVSLL ILQSLVVSSS QTEPDFNFFY WVNYWPGAIC DSQKGCCPPT KGNTASDFII HGLWPQFNNG TWPAFCDQTN LFDISKISDL VCQMEKKWTE
101: WGVWACPSNE TNLWEHEWNK HGTCVQSIFD QHSYFRTNLK FKHKVHLLNI LIQKGIKPND GFYSLDEIKN AIKCAIGFAP GIECNEDVKG NKQLFQIYIC
201: LDNYAKEFVE CPYVPDKSCA SKIKFPSLPE RDSLNESLSV MSSVSTT
101: WGVWACPSNE TNLWEHEWNK HGTCVQSIFD QHSYFRTNLK FKHKVHLLNI LIQKGIKPND GFYSLDEIKN AIKCAIGFAP GIECNEDVKG NKQLFQIYIC
201: LDNYAKEFVE CPYVPDKSCA SKIKFPSLPE RDSLNESLSV MSSVSTT
Arabidopsis Description
Ribonuclease T2 family protein [Source:UniProtKB/TrEMBL;Acc:F4HUG9]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.