Factsheet for TraesCS1A01G152800.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 7
endoplasmic reticulum 4
vacuole 4
plasma membrane 4
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1D01G149800.1	Wheat	extracellular	97.14	97.14
TraesCS1B01G170200.1	Wheat	extracellular	96.73	96.73
HORVU1Hr1G093560.1	Barley	extracellular	93.06	93.06
HORVU1Hr1G093780.1	Barley	vacuole	91.43	91.43
HORVU1Hr1G093660.11	Barley	extracellular	89.8	88.0
Os09t0537700-02	Rice	extracellular	76.73	74.6
EER99262	Sorghum	extracellular	66.94	65.86
GSMUA_Achr4P08950_001	Banana	extracellular	44.08	44.81
TraesCS1A01G152600.1	Wheat	unclear	42.04	40.87
TraesCS6A01G339600.1	Wheat	extracellular	31.84	34.21
TraesCS2A01G264000.1	Wheat	extracellular	30.61	32.61
TraesCS2A01G157400.1	Wheat	extracellular	27.76	28.22
TraesCS2A01G157300.1	Wheat	extracellular	26.12	24.81
TraesCS3A01G398200.1	Wheat	endoplasmic reticulum, extracellular, vacuole	24.9	21.55
TraesCS3A01G398300.1	Wheat	endoplasmic reticulum, extracellular	22.86	21.46

Protein Annotations

Gene3D:3.90.730.10	MapMan:35.1	GO:GO:0003674	GO:GO:0003676	GO:GO:0003723	GO:GO:0003824
GO:GO:0004518	GO:GO:0005488	GO:GO:0016787	GO:GO:0033897	InterPro:IPR036430	PFAM:PF00445
PANTHER:PTHR11240	PANTHER:PTHR11240:SF24	InterPro:RNase_T2-like	InterPro:RNase_T2-like_sf	InterPro:Ribonuclease_T2_eukaryotic	SUPFAM:SSF55895
SignalP:SignalP-noTM	TMHMM:TMhelix	EnsemblPlantsGene:TraesCS1A01G152800	EnsemblPlants:TraesCS1A01G152800.1	TIGR:cd01061	SEG:seg

Description

No Description!

Coordinates

chr1A:-:264213902..264217780

Molecular Weight (calculated)

27785.4 Da

IEP (calculated)

7.027

GRAVY (calculated)

-0.176

Length

245 amino acids

Sequence
(BLAST)

001: MAQRTISLCL ILGLLAAAAP ANATSFDFYY LILMWPGAYC VDSEYGCCVP KYGYPAEDFF IQSFTTFDLS LNKAIVRCNS DKPFDINKLE PIENNLNHYW
101: SNIHCPRTNG TSTWKSEWRS YGVCSGLKEV DYFRAALNLR KNADVLGALA EQGINPDYRL YSTEHIKWAV NQKLGVMPGM QCRDGPFGKK QLYQIYLCVD
201: KNGETIIDCP KLPKLHCPEE VLFHPFHTWM LNATSPAKIM LPTEA

Best Arabidopsis Sequence Match ( AT1G26820.1 )
(BLAST)

001: MKFFIFILAL QQLYVQSFAQ DFDFFYFVLQ WPGAYCDSRH SCCYPQTGKP AADFGIHGLW PNYKTGGWPQ NCNPDSRFDD LRVSDLMSDL QREWPTLSCP
101: SNDGMKFWTH EWEKHGTCAE SELDQHDYFE AGLKLKQKAN LLHALTNAGI KPDDKFYEMK DIENTIKQVV GFAPGIECNK DSSHNSQLYQ IYLCVDTSAS
201: KFINCPVMPH GRCDSRVQFP KF

Arabidopsis Description

RNS3Ribonuclease 3 [Source:UniProtKB/Swiss-Prot;Acc:P42815]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.