Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 8
- endoplasmic reticulum 5
- vacuole 5
- plasma membrane 5
- golgi 5
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1D01G149800.1 | Wheat | extracellular | 97.96 | 97.96 |
| TraesCS1A01G152800.1 | Wheat | extracellular | 96.73 | 96.73 |
| HORVU1Hr1G093560.1 | Barley | extracellular | 92.24 | 92.24 |
| HORVU1Hr1G093780.1 | Barley | vacuole | 90.61 | 90.61 |
| HORVU1Hr1G093660.11 | Barley | extracellular | 89.8 | 88.0 |
| Os09t0537700-02 | Rice | extracellular | 77.55 | 75.4 |
| EER99262 | Sorghum | extracellular | 66.94 | 65.86 |
| GSMUA_Achr4P08950_001 | Banana | extracellular | 43.27 | 43.98 |
| TraesCS1B01G170100.1 | Wheat | endoplasmic reticulum, extracellular | 41.22 | 39.45 |
| TraesCS6B01G370600.1 | Wheat | extracellular | 33.06 | 35.53 |
| TraesCS2B01G278200.1 | Wheat | extracellular | 31.84 | 33.91 |
| TraesCS2B01G182900.1 | Wheat | extracellular | 27.35 | 27.92 |
| TraesCS3B01G430200.1 | Wheat | endoplasmic reticulum, extracellular, mitochondrion | 24.49 | 21.2 |
| TraesCS3B01G430300.1 | Wheat | unclear | 22.45 | 19.71 |
Protein Annotations
| Gene3D:3.90.730.10 | MapMan:35.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003723 | GO:GO:0003824 |
| GO:GO:0004518 | GO:GO:0005488 | GO:GO:0016787 | GO:GO:0033897 | InterPro:IPR036430 | PFAM:PF00445 |
| PANTHER:PTHR11240 | PANTHER:PTHR11240:SF24 | InterPro:RNase_T2-like | InterPro:RNase_T2-like_sf | InterPro:Ribonuclease_T2_eukaryotic | SUPFAM:SSF55895 |
| SignalP:SignalP-noTM | TMHMM:TMhelix | EnsemblPlantsGene:TraesCS1B01G170200 | EnsemblPlants:TraesCS1B01G170200.1 | TIGR:cd01061 | SEG:seg |
Description
No Description!
Coordinates
chr1B:+:302033170..302037110
Molecular Weight (calculated)
27704.3 Da
IEP (calculated)
7.290
GRAVY (calculated)
-0.166
Length
245 amino acids
Sequence
(BLAST)
(BLAST)
001: MAQRTISLCL ILGLLAAAAP ANATSFDFYY LILMWPGAYC VDSEYGCCVP KYGYPAEDFF IQSFTTFDLS LNKAVVRCNG DKPFDINKLE PIENNLNHYW
101: SNIHCPRTDG TSTWKSEWRS YGVCSGLKEV DYFRAALNLR KNADVLGALA EQGINPDYRL YSTEHIKWAV NQKLGVMPGV QCRDGPFGKK QLYQIYLCVD
201: KNGEAFIDCP KLPKLQCPEE VLFHPFHTWM LNATSPAKIM LPTKA
101: SNIHCPRTDG TSTWKSEWRS YGVCSGLKEV DYFRAALNLR KNADVLGALA EQGINPDYRL YSTEHIKWAV NQKLGVMPGV QCRDGPFGKK QLYQIYLCVD
201: KNGEAFIDCP KLPKLQCPEE VLFHPFHTWM LNATSPAKIM LPTKA
001: MGAKGCVNVL LKLLVFQGLF VSRPQEDFDF FYFVLQWPGA YCDTSRACCY PTSGKPAADF GIHGLWPNYN GGSWPSNCDP DSQFDRSQIS DLVSSLKKNW
101: PTLSCPSNEG FNFWEHEWEK HGTCSESVMD QHEYFENALK LKQKANLLQI LKNSGINPDD GFYNLDKITN AIKDGIGFTP GIECNKDPER NAQLHQIYIC
201: VDTSGTEFIE CPVLPRGSCP SQIQFSKF
101: PTLSCPSNEG FNFWEHEWEK HGTCSESVMD QHEYFENALK LKQKANLLQI LKNSGINPDD GFYNLDKITN AIKDGIGFTP GIECNKDPER NAQLHQIYIC
201: VDTSGTEFIE CPVLPRGSCP SQIQFSKF
Arabidopsis Description
F7A19.32 protein [Source:UniProtKB/TrEMBL;Acc:Q9XI64]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.