Subcellular Localization
min:
: max
Winner_takes_all: unclear
Predictor Summary:
Predictor Summary:
- extracellular 6
- endoplasmic reticulum 5
- vacuole 4
- plasma membrane 4
- golgi 4
Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
unclear:
25769308
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
TraesCS3A01G398300.1 | Wheat | endoplasmic reticulum, extracellular | 90.32 | 96.55 |
TraesCS3D01G392300.1 | Wheat | extracellular | 96.42 | 95.73 |
HORVU3Hr1G089580.5 | Barley | cytosol, extracellular | 92.83 | 84.36 |
OQU88033 | Sorghum | endoplasmic reticulum, extracellular, vacuole | 72.04 | 72.83 |
HORVU6Hr1G017960.3 | Barley | plastid | 36.92 | 59.2 |
Os01t0897200-01 | Rice | extracellular, vacuole | 58.42 | 57.39 |
KRH47963 | Soybean | nucleus | 45.52 | 47.04 |
AT2G39780.1 | Thale cress | extracellular | 43.01 | 46.33 |
TraesCS3B01G430200.1 | Wheat | endoplasmic reticulum, extracellular, mitochondrion | 46.95 | 46.29 |
GSMUA_Achr7P23750_001 | Banana | mitochondrion | 49.46 | 46.0 |
KRH06524 | Soybean | extracellular | 43.73 | 45.35 |
CDY60490 | Canola | extracellular, plasma membrane, vacuole | 40.86 | 44.53 |
Bra032671.1-P | Field mustard | extracellular | 41.58 | 43.77 |
CDY39709 | Canola | extracellular | 41.58 | 43.77 |
Solyc09g020110.2.1 | Tomato | plastid | 38.71 | 41.54 |
Solyc06g082890.2.1 | Tomato | extracellular, plasma membrane | 40.5 | 40.94 |
Zm00001d042512_P006 | Maize | endoplasmic reticulum, extracellular, vacuole | 52.33 | 40.9 |
TraesCS6B01G370600.1 | Wheat | extracellular | 27.96 | 34.21 |
PGSC0003DMT400071177 | Potato | cytosol, nucleus, peroxisome | 27.96 | 32.64 |
TraesCS2B01G182900.1 | Wheat | extracellular | 27.6 | 32.08 |
VIT_00s1339g00010.t01 | Wine grape | cytosol | 11.83 | 31.73 |
TraesCS2B01G278200.1 | Wheat | extracellular | 25.81 | 31.3 |
TraesCS1B01G170200.1 | Wheat | extracellular | 19.71 | 22.45 |
TraesCS1B01G170100.1 | Wheat | endoplasmic reticulum, extracellular | 18.28 | 19.92 |
Protein Annotations
Gene3D:3.90.730.10 | MapMan:35.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003723 | GO:GO:0003824 |
GO:GO:0004518 | GO:GO:0005488 | GO:GO:0016787 | GO:GO:0033897 | InterPro:IPR036430 | PFAM:PF00445 |
ScanProsite:PS00530 | ScanProsite:PS00531 | PANTHER:PTHR11240 | PANTHER:PTHR11240:SF37 | InterPro:RNase_T2-like | InterPro:RNase_T2-like_sf |
InterPro:RNase_T2_His_AS_1 | InterPro:RNase_T2_His_AS_2 | InterPro:Ribonuclease_T2_eukaryotic | SUPFAM:SSF55895 | SignalP:SignalP-noTM | TMHMM:TMhelix |
EnsemblPlantsGene:TraesCS3B01G430300 | EnsemblPlants:TraesCS3B01G430300.1 | TIGR:cd01061 | SEG:seg | : | : |
Description
No Description!
Coordinates
chr3B:+:669711018..669713385
Molecular Weight (calculated)
30831.7 Da
IEP (calculated)
6.751
GRAVY (calculated)
-0.082
Length
279 amino acids
Sequence
(BLAST)
(BLAST)
001: MATATATCLL AVWALVAAGL FGTGLARASV APAAVGKEQR EFDYFALALQ WPGTICSSTR HCCAVNGCCR SEALHTFTIH GLWPDYDDGT WPSCCRHTSF
101: DMDKITPLKP TLDKYWPSLY CSTSSTCFSG RGPFWAHEWE KHGTCSSPVV HEELQYFTTA IDLYLKYNVT EMLATGDILV SNGKEYALSD VIDTIKHAFG
201: GSPQIICKKG SVEELRLCFT KDLKPRDCLT TSAMYKNLSK SKHCPRKISL PTYDPIVLTN STLEIVPEAS DNGLYFFTS
101: DMDKITPLKP TLDKYWPSLY CSTSSTCFSG RGPFWAHEWE KHGTCSSPVV HEELQYFTTA IDLYLKYNVT EMLATGDILV SNGKEYALSD VIDTIKHAFG
201: GSPQIICKKG SVEELRLCFT KDLKPRDCLT TSAMYKNLSK SKHCPRKISL PTYDPIVLTN STLEIVPEAS DNGLYFFTS
001: MASRLCLLLL VACIAGAFAG DVIELNRSQR EFDYFALSLQ WPGTYCRGTR HCCSKNACCR GSDAPTQFTI HGLWPDYNDG SWPSCCYRSD FKEKEISTLM
101: DGLEKYWPSL SCGSPSSCNG GKGSFWGHEW EKHGTCSSPV FHDEYNYFLT TLNLYLKHNV TDVLYQAGYV ASNSEKYPLG GIVTAIQNAF HITPEVVCKR
201: DAIDEIRICF YKDFKPRDCV GSQDLTSRKS CPKYVSLPEY TPLDGEAMVL KMPTEREAL
101: DGLEKYWPSL SCGSPSSCNG GKGSFWGHEW EKHGTCSSPV FHDEYNYFLT TLNLYLKHNV TDVLYQAGYV ASNSEKYPLG GIVTAIQNAF HITPEVVCKR
201: DAIDEIRICF YKDFKPRDCV GSQDLTSRKS CPKYVSLPEY TPLDGEAMVL KMPTEREAL
Arabidopsis Description
RNS2Ribonuclease 2 [Source:UniProtKB/Swiss-Prot;Acc:P42814]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.