Factsheet for Zm00001d042512_P006

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, extracellular, vacuole

Predictor Summary:

extracellular 5
endoplasmic reticulum 5
vacuole 5
plasma membrane 4
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, extracellular, vacuole
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
OQU88033	Sorghum	endoplasmic reticulum, extracellular, vacuole	52.1	67.39
TraesCS3B01G430300.1	Wheat	unclear	40.9	52.33
TraesCS3A01G398300.1	Wheat	endoplasmic reticulum, extracellular	37.82	51.72
TraesCS3D01G392300.1	Wheat	extracellular	40.06	50.89
HORVU3Hr1G089580.5	Barley	cytosol, extracellular	40.06	46.58
Os01t0897200-01	Rice	extracellular, vacuole	27.45	34.51
GSMUA_Achr7P23750_001	Banana	mitochondrion	28.01	33.33
AT2G39780.1	Thale cress	extracellular	22.13	30.5
VIT_00s1339g00010.t01	Wine grape	cytosol	8.68	29.81
CDY60490	Canola	extracellular, plasma membrane, vacuole	21.29	29.69
KRH47963	Soybean	nucleus	22.41	29.63
CDY39709	Canola	extracellular	21.85	29.43
Bra032671.1-P	Field mustard	extracellular	21.85	29.43
KRH06524	Soybean	extracellular	21.85	29.0
Solyc09g020110.2.1	Tomato	plastid	19.05	26.15
Solyc06g082890.2.1	Tomato	extracellular, plasma membrane	19.61	25.36
Zm00001d042511_P005	Maize	golgi, mitochondrion, plasma membrane	23.81	24.08
HORVU6Hr1G017960.3	Barley	plastid	9.8	20.11
PGSC0003DMT400071177	Potato	cytosol, nucleus, peroxisome	13.45	20.08
Zm00001d032186_P001	Maize	extracellular	12.61	19.65
Zm00001d022228_P001	Maize	extracellular	12.32	16.99
Zm00001d022630_P001	Maize	plastid	10.92	15.48

Protein Annotations

Gene3D:3.90.730.10	MapMan:35.2	UniProt:A0A1D6N4Q6	GO:GO:0003674	GO:GO:0003676	GO:GO:0003723
GO:GO:0003824	GO:GO:0004518	GO:GO:0005488	GO:GO:0006139	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016787	GO:GO:0033897	GO:GO:0090502	InterPro:IPR036430	ProteinID:ONM35620.1
PFAM:PF00445	PANTHER:PTHR11240	PANTHER:PTHR11240:SF37	InterPro:RNase_T2-like	InterPro:RNase_T2-like_sf	SUPFAM:SSF55895
SignalP:SignalP-noTM	UniParc:UPI0008434140	EnsemblPlantsGene:Zm00001d042512	EnsemblPlants:Zm00001d042512_P006	EnsemblPlants:Zm00001d042512_T006	SEG:seg

Description

Ribonuclease 2

Coordinates

chr3:+:170272238..170276048

Molecular Weight (calculated)

39936.6 Da

IEP (calculated)

8.977

GRAVY (calculated)

-0.032

Length

357 amino acids

Sequence
(BLAST)

001: MTMATKAACV LAVWVLVASG LSDLGSARAP LGSKPQREFD YFALSLQWPG TICASTRHCC ATNGCCRYVL RAVPRRRPVA PFPYLILPSK RRELAARPVD
101: QFSAIRFRFG RCETSRPFFF VSPVLPRVQL GASPDVHDPR AMAGLRRRDL AVVLPPHPIR DGQDVSDNCM TGIPLTWSFI FQRNMEPALP LWFRMNYSIS
201: PLPLTSTSSI TLRMVLRKWC LVPTQSENQH GALCFLYHKF ESLGLQEMLS SGWIQVSNGK EYALSDVIDT IKHAFGGSPQ IVCKRGSIEE LRLCFDKELK
301: PRDCLTTSLA NGSVSKSKHC PRYITLPTYD PLVLANSTVE IMTQFDEFEV PAALYTA

Best Arabidopsis Sequence Match ( AT2G39780.2 )
(BLAST)

001: MASRLCLLLL VACIAGAFAG DVIELNRSQR EFDYFALSLQ WPGTYCRGTR HCCSKNACCR GSDAPTQFTI HGLWPDYNDG SWPSCCYRSD FKEKEISTLM
101: DGLEKYWPSL SCGSPSSCNG GKGSFWGHED VLYQAGYVAS NSEKYPLGGI VTAIQNAFHI TPEVVCKRDA IDEIRICFYK DFKPRDCVGS QDLTSRKSCP
201: KYVSLPEYTP LDGEAMVLKM PTEREAL

Arabidopsis Description

RNS2Ribonuclease 2 [Source:UniProtKB/Swiss-Prot;Acc:P42814]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.