Factsheet for Zm00001d042511_P005

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plasma membrane, golgi

Predictor Summary:

mitochondrion 3
plasma membrane 3
extracellular 2
endoplasmic reticulum 2
vacuole 2
golgi 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi, mitochondrion, plasma membrane
Any Predictor:	mitochondrion, secretory
iPSORT:	mitochondrion
MultiLoc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG33898	Sorghum	extracellular, plasma membrane	65.44	75.74
TraesCS3B01G430200.1	Wheat	endoplasmic reticulum, extracellular, mitochondrion	49.86	62.19
TraesCS3A01G398200.1	Wheat	endoplasmic reticulum, extracellular, vacuole	49.86	62.19
HORVU3Hr1G089550.5	Barley	endoplasmic reticulum, extracellular, vacuole	49.29	61.48
TraesCS3D01G392200.1	Wheat	endoplasmic reticulum, extracellular, vacuole	48.16	60.07
Os01t0897300-01	Rice	extracellular	46.46	58.99
GSMUA_Achr7P23750_001	Banana	mitochondrion	33.71	39.67
AT2G39780.1	Thale cress	extracellular	28.9	39.38
CDY60490	Canola	extracellular, plasma membrane, vacuole	28.33	39.06
KRH06524	Soybean	extracellular	29.46	38.66
KRH47963	Soybean	nucleus	29.46	38.52
Bra032671.1-P	Field mustard	extracellular	28.05	37.36
CDY39709	Canola	extracellular	28.05	37.36
Solyc09g020110.2.1	Tomato	plastid	26.63	36.15
VIT_00s1339g00010.t01	Wine grape	cytosol	10.48	35.58
Solyc06g082890.2.1	Tomato	extracellular, plasma membrane	26.63	34.06
Zm00001d032186_P001	Maize	extracellular	17.56	27.07
PGSC0003DMT400071177	Potato	cytosol, nucleus, peroxisome	17.0	25.1
Zm00001d042512_P006	Maize	endoplasmic reticulum, extracellular, vacuole	24.08	23.81
Zm00001d022630_P001	Maize	plastid	15.86	22.22
Zm00001d022228_P001	Maize	extracellular	15.01	20.46

Protein Annotations

Gene3D:3.90.730.10	MapMan:35.1	UniProt:A0A1D6N4Q0	GO:GO:0003674	GO:GO:0003676	GO:GO:0003723
GO:GO:0003824	GO:GO:0004518	GO:GO:0005488	GO:GO:0006139	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016787	GO:GO:0033897	GO:GO:0090502	InterPro:IPR036430	ProteinID:ONM35609.1
PFAM:PF00445	PANTHER:PTHR11240	PANTHER:PTHR11240:SF37	InterPro:RNase_T2-like	InterPro:RNase_T2-like_sf	SUPFAM:SSF55895
SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI000843FD86	EnsemblPlantsGene:Zm00001d042511	EnsemblPlants:Zm00001d042511_P005	EnsemblPlants:Zm00001d042511_T005
SEG:seg	:	:	:	:	:

Description

Ribonuclease 2

Coordinates

chr3:+:170268512..170271282

Molecular Weight (calculated)

40048.4 Da

IEP (calculated)

9.476

GRAVY (calculated)

-0.105

Length

353 amino acids

Sequence
(BLAST)

001: METRRPRRGW NKRFVLPLAL LCLAVLLPGA LLPPSASASS SSPAAGGGSR KRRWVGFDYY VLALQWPGTI CRETSNCCDT NGCCRYRLAY HSLSSGSRFV
101: SPLKSISFFT HLDAALDELY TILHWMNCIR YCTGCTVYDT ALNASFMTYE FVRFKNDLRI LMLMPILEKY WPSLYCGSSS TCFGGRGPFW VHEDEYDYFS
201: TALYLYSKYN VTKALRKARI RPTSGRKYAV GHIVAVIEYA FGAMPSLVCK NGSVQELRLC FHKDYQPRDC TLEAGSAPNG RSYCPRYITF PSYKPSGEFL
301: FSITAVWWPI LRRGSTTNPM ARFRATCVRL TLSSVQDSRF CGPLPSRVCI KYQ

Best Arabidopsis Sequence Match ( AT2G39780.1 )
(BLAST)

001: MASRLCLLLL VACIAGAFAG DVIELNRSQR EFDYFALSLQ WPGTYCRGTR HCCSKNACCR GSDAPTQFTI HGLWPDYNDG SWPSCCYRSD FKEKEISTLM
101: DGLEKYWPSL SCGSPSSCNG GKGSFWGHEW EKHGTCSSPV FHDEYNYFLT TLNLYLKHNV TDVLYQAGYV ASNSEKYPLG GIVTAIQNAF HITPEVVCKR
201: DAIDEIRICF YKDFKPRDCV GSQDLTSRKS CPKYVSLPEY TPLDGEAMVL KMPTEREAL

Arabidopsis Description

RNS2Ribonuclease 2 [Source:UniProtKB/Swiss-Prot;Acc:P42814]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.