Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- endoplasmic reticulum 5
- golgi 5
- extracellular 8
- vacuole 4
- plasma membrane 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra032671.1-P | Field mustard | extracellular | 88.42 | 86.42 |
| CDY39709 | Canola | extracellular | 88.42 | 86.42 |
| CDY60490 | Canola | extracellular, plasma membrane, vacuole | 83.78 | 84.77 |
| Solyc09g020110.2.1 | Tomato | plastid | 57.92 | 57.69 |
| KRH06524 | Soybean | extracellular | 59.07 | 56.88 |
| KRH47963 | Soybean | nucleus | 58.69 | 56.3 |
| Solyc06g082890.2.1 | Tomato | extracellular, plasma membrane | 55.6 | 52.17 |
| VIT_00s1339g00010.t01 | Wine grape | cytosol | 20.46 | 50.96 |
| GSMUA_Achr7P23750_001 | Banana | mitochondrion | 54.05 | 46.67 |
| TraesCS3A01G398300.1 | Wheat | endoplasmic reticulum, extracellular | 45.17 | 44.83 |
| OQU88033 | Sorghum | endoplasmic reticulum, extracellular, vacuole | 46.72 | 43.84 |
| Os01t0897300-01 | Rice | extracellular | 46.72 | 43.53 |
| TraesCS3B01G430300.1 | Wheat | unclear | 46.33 | 43.01 |
| TraesCS3D01G392300.1 | Wheat | extracellular | 45.95 | 42.35 |
| PGSC0003DMT400071177 | Potato | cytosol, nucleus, peroxisome | 39.0 | 42.26 |
| TraesCS3D01G392200.1 | Wheat | endoplasmic reticulum, extracellular, vacuole | 45.17 | 41.34 |
| TraesCS3B01G430200.1 | Wheat | endoplasmic reticulum, extracellular, mitochondrion | 45.17 | 41.34 |
| TraesCS3A01G398200.1 | Wheat | endoplasmic reticulum, extracellular, vacuole | 44.79 | 40.99 |
| HORVU3Hr1G089550.5 | Barley | endoplasmic reticulum, extracellular, vacuole | 43.63 | 39.93 |
| KXG33898 | Sorghum | extracellular, plasma membrane | 46.72 | 39.67 |
| HORVU3Hr1G089580.5 | Barley | cytosol, extracellular | 45.17 | 38.11 |
| HORVU6Hr1G017960.3 | Barley | plastid | 25.1 | 37.36 |
| AT1G14220.1 | Thale cress | extracellular | 31.66 | 35.96 |
| AT2G02990.1 | Thale cress | extracellular | 30.12 | 33.91 |
| Os01t0897200-01 | Rice | extracellular, vacuole | 36.68 | 33.45 |
| AT1G26820.1 | Thale cress | extracellular | 27.41 | 31.98 |
| Zm00001d042511_P005 | Maize | golgi, mitochondrion, plasma membrane | 39.38 | 28.9 |
| AT1G14210.1 | Thale cress | extracellular | 25.1 | 26.32 |
| OQU81225 | Sorghum | cytosol | 11.58 | 24.39 |
| Zm00001d042512_P006 | Maize | endoplasmic reticulum, extracellular, vacuole | 30.5 | 22.13 |
Protein Annotations
| Gene3D:3.90.730.10 | MapMan:35.1 | EntrezGene:818563 | ProteinID:AAB87127.1 | ProteinID:AEC09723.1 | ArrayExpress:AT2G39780 |
| EnsemblPlantsGene:AT2G39780 | RefSeq:AT2G39780 | TAIR:AT2G39780 | RefSeq:AT2G39780-TAIR-G | EnsemblPlants:AT2G39780.1 | TAIR:AT2G39780.1 |
| Unigene:At.21798 | EMBL:BT025792 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003723 | GO:GO:0003824 |
| GO:GO:0004518 | GO:GO:0004519 | GO:GO:0004521 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005773 | GO:GO:0005783 | GO:GO:0006139 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009056 | GO:GO:0009987 | GO:GO:0010168 | GO:GO:0010507 | GO:GO:0016075 |
| GO:GO:0016787 | GO:GO:0033897 | GO:GO:0090305 | GO:GO:0090502 | InterPro:IPR036430 | EMBL:M98336 |
| RefSeq:NP_030524.1 | UniProt:P42814 | PFAM:PF00445 | PO:PO:0000003 | PO:PO:0000013 | PO:PO:0000037 |
| PO:PO:0000084 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001016 | PO:PO:0001017 | PO:PO:0001054 |
| PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 |
| PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 |
| PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 |
| PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 |
| PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 |
| PO:PO:0025195 | PO:PO:0025281 | ScanProsite:PS00530 | ScanProsite:PS00531 | PANTHER:PTHR11240 | PANTHER:PTHR11240:SF37 |
| UniProt:Q1ECE2 | Symbol:RNS2 | InterPro:RNase_T2-like | InterPro:RNase_T2-like_sf | InterPro:RNase_T2_His_AS_1 | InterPro:RNase_T2_His_AS_2 |
| InterPro:Ribonuclease_T2_eukaryotic | SUPFAM:SSF55895 | SignalP:SignalP-noTM | UniParc:UPI0000048623 | EMBL:Z26559 | SEG:seg |
Description
RNS2Ribonuclease 2 [Source:UniProtKB/Swiss-Prot;Acc:P42814]
Coordinates
chr2:+:16591117..16593775
Molecular Weight (calculated)
29154.5 Da
IEP (calculated)
6.376
GRAVY (calculated)
-0.317
Length
259 amino acids
Sequence
(BLAST)
(BLAST)
001: MASRLCLLLL VACIAGAFAG DVIELNRSQR EFDYFALSLQ WPGTYCRGTR HCCSKNACCR GSDAPTQFTI HGLWPDYNDG SWPSCCYRSD FKEKEISTLM
101: DGLEKYWPSL SCGSPSSCNG GKGSFWGHEW EKHGTCSSPV FHDEYNYFLT TLNLYLKHNV TDVLYQAGYV ASNSEKYPLG GIVTAIQNAF HITPEVVCKR
201: DAIDEIRICF YKDFKPRDCV GSQDLTSRKS CPKYVSLPEY TPLDGEAMVL KMPTEREAL
101: DGLEKYWPSL SCGSPSSCNG GKGSFWGHEW EKHGTCSSPV FHDEYNYFLT TLNLYLKHNV TDVLYQAGYV ASNSEKYPLG GIVTAIQNAF HITPEVVCKR
201: DAIDEIRICF YKDFKPRDCV GSQDLTSRKS CPKYVSLPEY TPLDGEAMVL KMPTEREAL
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.