Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- endoplasmic reticulum 5
- golgi 5
- extracellular 8
- vacuole 4
- plasma membrane 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY03023 | Canola | extracellular | 89.13 | 89.52 |
| CDY62181 | Canola | extracellular | 87.83 | 88.21 |
| CDY45186 | Canola | extracellular | 87.83 | 88.21 |
| Bra024795.1-P | Field mustard | extracellular | 87.83 | 88.21 |
| Bra026570.1-P | Field mustard | extracellular | 87.83 | 88.21 |
| CDY09344 | Canola | extracellular | 88.7 | 87.93 |
| KRH70736 | Soybean | extracellular | 68.26 | 69.16 |
| KRG89631 | Soybean | endoplasmic reticulum, extracellular | 65.22 | 66.08 |
| KRH74869 | Soybean | endoplasmic reticulum, extracellular, plasma membrane | 67.39 | 65.13 |
| GSMUA_Achr5P23330_001 | Banana | extracellular | 63.48 | 64.32 |
| GSMUA_Achr7P21030_001 | Banana | extracellular | 60.87 | 63.06 |
| AT1G14220.1 | Thale cress | extracellular | 60.0 | 60.53 |
| AT1G26820.1 | Thale cress | extracellular | 56.52 | 58.56 |
| EES15044 | Sorghum | extracellular | 56.52 | 57.78 |
| TraesCS6A01G339600.1 | Wheat | extracellular | 56.52 | 57.02 |
| TraesCS6D01G320200.1 | Wheat | extracellular | 56.09 | 56.58 |
| Zm00001d032186_P001 | Maize | extracellular | 56.09 | 56.33 |
| TraesCS6B01G370600.1 | Wheat | extracellular | 55.65 | 56.14 |
| HORVU6Hr1G081930.1 | Barley | cytosol | 18.26 | 55.26 |
| TraesCS2B01G278200.1 | Wheat | extracellular | 54.78 | 54.78 |
| Os08t0434100-01 | Rice | extracellular | 54.35 | 54.59 |
| TraesCS2A01G264000.1 | Wheat | extracellular | 54.35 | 54.35 |
| TraesCS2D01G260000.1 | Wheat | extracellular | 54.35 | 54.35 |
| HORVU0Hr1G017230.3 | Barley | extracellular | 52.61 | 52.84 |
| GSMUA_Achr4P00460_001 | Banana | endoplasmic reticulum, extracellular, plastid | 60.0 | 52.27 |
| HORVU2Hr1G062880.3 | Barley | plastid | 55.65 | 48.67 |
| HORVU6Hr1G081950.3 | Barley | extracellular | 40.0 | 45.32 |
| AT1G14210.1 | Thale cress | extracellular | 47.83 | 44.53 |
| AT2G39780.1 | Thale cress | extracellular | 33.91 | 30.12 |
Protein Annotations
| Gene3D:3.90.730.10 | MapMan:35.1 | EntrezGene:814828 | ProteinID:AAC32917.1 | ProteinID:AEC05652.1 | ArrayExpress:AT2G02990 |
| EnsemblPlantsGene:AT2G02990 | RefSeq:AT2G02990 | TAIR:AT2G02990 | RefSeq:AT2G02990-TAIR-G | EnsemblPlants:AT2G02990.1 | TAIR:AT2G02990.1 |
| EMBL:AY072413 | EMBL:AY086747 | EMBL:AY114710 | Unigene:At.10792 | EMBL:DQ446504 | EMBL:DQ652992 |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003723 | GO:GO:0003824 | GO:GO:0004518 | GO:GO:0004519 |
| GO:GO:0004540 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005576 | GO:GO:0005618 | GO:GO:0005623 |
| GO:GO:0005886 | GO:GO:0006139 | GO:GO:0006950 | GO:GO:0007154 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009605 | GO:GO:0009611 | GO:GO:0009718 | GO:GO:0009987 | GO:GO:0009991 |
| GO:GO:0016020 | GO:GO:0016036 | GO:GO:0016787 | GO:GO:0030312 | GO:GO:0033897 | GO:GO:0090305 |
| GO:GO:0090501 | GO:GO:0090502 | InterPro:IPR036430 | RefSeq:NP_178399.1 | UniProt:P42813 | PFAM:PF00445 |
| PO:PO:0000293 | PO:PO:0001185 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0009009 | PO:PO:0009029 |
| PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0025022 |
| PO:PO:0025281 | ScanProsite:PS00530 | ScanProsite:PS00531 | PANTHER:PTHR11240 | PANTHER:PTHR11240:SF35 | Symbol:RNS1 |
| InterPro:RNase_T2-like | InterPro:RNase_T2-like_sf | InterPro:RNase_T2_His_AS_1 | InterPro:RNase_T2_His_AS_2 | InterPro:Ribonuclease_T2_eukaryotic | SUPFAM:SSF55895 |
| SignalP:SignalP-noTM | TMHMM:TMhelix | EMBL:U05206 | UniParc:UPI0000000FE6 | EMBL:Z27289 | EMBL:Z27290 |
| SEG:seg | : | : | : | : | : |
Description
RNS1Ribonuclease 1 [Source:UniProtKB/Swiss-Prot;Acc:P42813]
Coordinates
chr2:+:873506..874886
Molecular Weight (calculated)
25397.8 Da
IEP (calculated)
4.882
GRAVY (calculated)
-0.271
Length
230 amino acids
Sequence
(BLAST)
(BLAST)
001: MKILLASLCL ISLLVILPSV FSASSSSEDF DFFYFVQQWP GSYCDTQKKC CYPNSGKPAA DFGIHGLWPN YKDGTYPSNC DASKPFDSST ISDLLTSMKK
101: SWPTLACPSG SGEAFWEHEW EKHGTCSESV IDQHEYFQTA LNLKQKTNLL GALTKAGINP DGKSYSLESI RDSIKESIGF TPWVECNRDG SGNSQLYQVY
201: LCVDRSGSGL IECPVFPHGK CGAEIEFPSF
101: SWPTLACPSG SGEAFWEHEW EKHGTCSESV IDQHEYFQTA LNLKQKTNLL GALTKAGINP DGKSYSLESI RDSIKESIGF TPWVECNRDG SGNSQLYQVY
201: LCVDRSGSGL IECPVFPHGK CGAEIEFPSF
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.