Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||
|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU0Hr1G017230.3 | Barley | extracellular | 96.05 | 31.88 |
| TraesCS6A01G339600.1 | Wheat | extracellular | 88.16 | 29.39 |
| TraesCS6D01G320200.1 | Wheat | extracellular | 88.16 | 29.39 |
| TraesCS6B01G370600.1 | Wheat | extracellular | 86.84 | 28.95 |
| EES15044 | Sorghum | extracellular | 77.63 | 26.22 |
| Os08t0434100-01 | Rice | extracellular | 77.63 | 25.76 |
| Zm00001d032186_P001 | Maize | extracellular | 77.63 | 25.76 |
| HORVU2Hr1G062880.3 | Barley | plastid | 78.95 | 22.81 |
| CDY62181 | Canola | extracellular | 57.89 | 19.21 |
| Bra026570.1-P | Field mustard | extracellular | 57.89 | 19.21 |
| CDY09344 | Canola | extracellular | 57.89 | 18.97 |
| KRH70736 | Soybean | extracellular | 56.58 | 18.94 |
| AT2G02990.1 | Thale cress | extracellular | 55.26 | 18.26 |
| GSMUA_Achr5P23330_001 | Banana | extracellular | 53.95 | 18.06 |
| KRG89631 | Soybean | endoplasmic reticulum, extracellular | 53.95 | 18.06 |
| KRH74869 | Soybean | endoplasmic reticulum, extracellular, plasma membrane | 55.26 | 17.65 |
| Bra024795.1-P | Field mustard | extracellular | 52.63 | 17.47 |
| CDY45186 | Canola | extracellular | 52.63 | 17.47 |
| CDY03023 | Canola | extracellular | 51.32 | 17.03 |
| GSMUA_Achr7P21030_001 | Banana | extracellular | 47.37 | 16.22 |
| GSMUA_Achr4P00460_001 | Banana | endoplasmic reticulum, extracellular, plastid | 48.68 | 14.02 |
| HORVU2Hr1G028430.1 | Barley | extracellular | 39.47 | 12.5 |
| HORVU1Hr1G093670.1 | Barley | cytosol | 34.21 | 11.76 |
| HORVU1Hr1G093620.1 | Barley | extracellular | 35.53 | 10.71 |
| HORVU1Hr1G093560.1 | Barley | extracellular | 34.21 | 10.61 |
| HORVU1Hr1G093660.11 | Barley | extracellular | 34.21 | 10.4 |
| HORVU1Hr1G093780.1 | Barley | vacuole | 32.89 | 10.2 |
| HORVU1Hr1G093570.1 | Barley | vacuole | 35.53 | 9.64 |
| HORVU3Hr1G089550.5 | Barley | endoplasmic reticulum, extracellular, vacuole | 19.74 | 5.3 |
| HORVU3Hr1G089580.5 | Barley | cytosol, extracellular | 21.05 | 5.21 |
| HORVU2Hr1G037400.1 | Barley | extracellular | 9.21 | 4.0 |
| HORVU6Hr1G081950.3 | Barley | extracellular | 10.53 | 3.94 |
| HORVU6Hr1G017960.3 | Barley | plastid | 0.0 | 0.0 |
Protein Annotations
| Gene3D:3.90.730.10 | MapMan:35.1 | UniProt:A0A287UX90 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003723 |
| GO:GO:0003824 | GO:GO:0004518 | GO:GO:0005488 | GO:GO:0006139 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009987 | GO:GO:0016787 | GO:GO:0033897 | GO:GO:0090502 | EnsemblPlantsGene:HORVU6Hr1G081930 | EnsemblPlants:HORVU6Hr1G081930.1 |
| InterPro:IPR036430 | PFAM:PF00445 | PANTHER:PTHR11240 | PANTHER:PTHR11240:SF35 | InterPro:RNase_T2-like | InterPro:RNase_T2-like_sf |
| SUPFAM:SSF55895 | UniParc:UPI000B485D00 | : | : | : | : |
Description
No Description!
Coordinates
chrchr6H:-:546832404..546833054
Molecular Weight (calculated)
7886.1 Da
IEP (calculated)
4.153
GRAVY (calculated)
-0.293
Length
76 amino acids
Sequence
(BLAST)
(BLAST)
1: XXXAPDGGYY TLSAVKGAIQ QGTGFEPFVE CNRDESGNSQ LYQLYFCVDA RASGFVECPV QPGGRPCGDR IEFPAF
001: MKILLASLCL ISLLVILPSV FSASSSSEDF DFFYFVQQWP GSYCDTQKKC CYPNSGKPAA DFGIHGLWPN YKDGTYPSNC DASKPFDSST ISDLLTSMKK
101: SWPTLACPSG SGEAFWEHEW EKHGTCSESV IDQHEYFQTA LNLKQKTNLL GALTKAGINP DGKSYSLESI RDSIKESIGF TPWVECNRDG SGNSQLYQVY
201: LCVDRSGSGL IECPVFPHGK CGAEIEFPSF
101: SWPTLACPSG SGEAFWEHEW EKHGTCSESV IDQHEYFQTA LNLKQKTNLL GALTKAGINP DGKSYSLESI RDSIKESIGF TPWVECNRDG SGNSQLYQVY
201: LCVDRSGSGL IECPVFPHGK CGAEIEFPSF
Arabidopsis Description
RNS1Ribonuclease 1 [Source:UniProtKB/Swiss-Prot;Acc:P42813]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.