Factsheet for HORVU6Hr1G017960.3

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 3
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	cytosol
TargetP:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3A01G398300.1	Wheat	endoplasmic reticulum, extracellular	59.77	39.85
TraesCS3B01G430300.1	Wheat	unclear	59.2	36.92
HORVU3Hr1G089580.5	Barley	cytosol, extracellular	64.37	36.48
TraesCS3D01G392300.1	Wheat	extracellular	58.62	36.3
Os01t0897200-01	Rice	extracellular, vacuole	54.02	33.1
OQU88033	Sorghum	endoplasmic reticulum, extracellular, vacuole	50.57	31.88
HORVU6Hr1G081950.3	Barley	extracellular	33.91	29.06
HORVU3Hr1G089550.5	Barley	endoplasmic reticulum, extracellular, vacuole	41.95	25.8
KRH47963	Soybean	nucleus	39.66	25.56
AT2G39780.1	Thale cress	extracellular	37.36	25.1
CDY60490	Canola	extracellular, plasma membrane, vacuole	36.78	25.0
GSMUA_Achr7P23750_001	Banana	mitochondrion	43.1	25.0
KRH06524	Soybean	extracellular	37.93	24.54
Bra032671.1-P	Field mustard	extracellular	36.78	24.15
CDY39709	Canola	extracellular	36.78	24.15
Solyc09g020110.2.1	Tomato	plastid	35.06	23.46
Solyc06g082890.2.1	Tomato	extracellular, plasma membrane	34.48	21.74
HORVU0Hr1G017230.3	Barley	extracellular	27.59	20.96
HORVU2Hr1G028430.1	Barley	extracellular	26.44	19.17
HORVU2Hr1G062880.3	Barley	plastid	27.59	18.25
PGSC0003DMT400071177	Potato	cytosol, nucleus, peroxisome	23.56	17.15
HORVU2Hr1G037400.1	Barley	extracellular	13.22	13.14
HORVU1Hr1G093670.1	Barley	cytosol	16.67	13.12
HORVU1Hr1G093660.11	Barley	extracellular	17.82	12.4
HORVU1Hr1G093560.1	Barley	extracellular	17.24	12.24
HORVU1Hr1G093780.1	Barley	vacuole	16.67	11.84
HORVU1Hr1G093620.1	Barley	extracellular	14.94	10.32
Zm00001d042512_P006	Maize	endoplasmic reticulum, extracellular, vacuole	20.11	9.8
HORVU1Hr1G093570.1	Barley	vacuole	14.94	9.29
VIT_00s1339g00010.t01	Wine grape	cytosol	0.57	0.96
HORVU6Hr1G081930.1	Barley	cytosol	0.0	0.0

Protein Annotations

Gene3D:3.90.730.10	MapMan:35.1	UniProt:A0A287TGL3	GO:GO:0003674	GO:GO:0003676	GO:GO:0003723
GO:GO:0003824	GO:GO:0004518	GO:GO:0005488	GO:GO:0006139	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016787	GO:GO:0033897	GO:GO:0090502	EnsemblPlantsGene:HORVU6Hr1G017960	EnsemblPlants:HORVU6Hr1G017960.3
InterPro:IPR036430	PFAM:PF00445	ScanProsite:PS00530	ScanProsite:PS00531	PANTHER:PTHR11240	PANTHER:PTHR11240:SF37
InterPro:RNase_T2-like	InterPro:RNase_T2-like_sf	InterPro:RNase_T2_His_AS_1	InterPro:RNase_T2_His_AS_2	SUPFAM:SSF55895	UniParc:UPI000B468F90
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chrchr6H:+:43926974..43928295

Molecular Weight (calculated)

18643.2 Da

IEP (calculated)

8.681

GRAVY (calculated)

-0.334

Length

174 amino acids

Sequence
(BLAST)

001: LRPPSPSFPP STATAPSTPA RGPVRVRLGW GFLALRRFDL TRARVICFAL FHRCRKEPLH TFTIHGLWPD YDDGTWPSCC RRTSFDMDKI TPLKPTLDKY
101: WPSLYCSSSS TCFSGRGPFW AHEWEKHGTC SAPAVREELQ YFSTALDLYF KYNVTEMLAT GDIXXXXXXX XXXX

Best Arabidopsis Sequence Match ( AT2G39780.1 )
(BLAST)

001: MASRLCLLLL VACIAGAFAG DVIELNRSQR EFDYFALSLQ WPGTYCRGTR HCCSKNACCR GSDAPTQFTI HGLWPDYNDG SWPSCCYRSD FKEKEISTLM
101: DGLEKYWPSL SCGSPSSCNG GKGSFWGHEW EKHGTCSSPV FHDEYNYFLT TLNLYLKHNV TDVLYQAGYV ASNSEKYPLG GIVTAIQNAF HITPEVVCKR
201: DAIDEIRICF YKDFKPRDCV GSQDLTSRKS CPKYVSLPEY TPLDGEAMVL KMPTEREAL

Arabidopsis Description

RNS2Ribonuclease 2 [Source:UniProtKB/Swiss-Prot;Acc:P42814]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.