Factsheet for Os01t0897200-01

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, vacuole

Predictor Summary:

nucleus 2
extracellular 6
endoplasmic reticulum 4
vacuole 5
plasma membrane 4
golgi 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, vacuole
Any Predictor:	mitochondrion, nucleus, secretory
BaCelLo:	nucleus
EpiLoc:	nucleus
iPSORT:	secretory
MultiLoc:	mitochondrion
Plant-mPloc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3B01G430300.1	Wheat	unclear	57.39	58.42
TraesCS3A01G398300.1	Wheat	endoplasmic reticulum, extracellular	53.17	57.85
TraesCS3D01G392300.1	Wheat	extracellular	55.63	56.23
HORVU6Hr1G017960.3	Barley	plastid	33.1	54.02
HORVU3Hr1G089580.5	Barley	cytosol, extracellular	57.04	52.77
OQU81225	Sorghum	cytosol	19.37	44.72
Os01t0897300-01	Rice	extracellular	39.44	40.29
GSMUA_Achr7P23750_001	Banana	mitochondrion	42.25	40.0
KRH47963	Soybean	nucleus	37.32	39.26
KRH06524	Soybean	extracellular	35.21	37.17
AT2G39780.1	Thale cress	extracellular	33.45	36.68
CDY60490	Canola	extracellular, plasma membrane, vacuole	32.75	36.33
Solyc06g082890.2.1	Tomato	extracellular, plasma membrane	33.45	34.42
Bra032671.1-P	Field mustard	extracellular	32.04	34.34
CDY39709	Canola	extracellular	32.04	34.34
Solyc09g020110.2.1	Tomato	plastid	31.34	34.23
VIT_00s1339g00010.t01	Wine grape	cytosol	11.97	32.69
PGSC0003DMT400071177	Potato	cytosol, nucleus, peroxisome	27.46	32.64
Os07t0629300-00	Rice	cytosol	15.14	32.09
Os07t0629900-00	Rice	cytosol, extracellular	20.77	28.1
Zm00001d042512_P006	Maize	endoplasmic reticulum, extracellular, vacuole	34.51	27.45
Os08t0434100-01	Rice	extracellular	21.48	26.64
Os07t0630400-01	Rice	extracellular	20.77	23.05
Os09t0538000-04	Rice	extracellular	16.55	18.15
Os09t0537700-02	Rice	extracellular	15.49	17.46

Protein Annotations

Gene3D:3.90.730.10	MapMan:35.1	ProteinID:BAD82178.1	ProteinID:BAD82341.1	ProteinID:BAF07000.1	ProteinID:BAS75710.1
ProteinID:EEE55810.1	GO:GO:0003674	GO:GO:0003676	GO:GO:0003723	GO:GO:0003824	GO:GO:0004518
GO:GO:0005488	GO:GO:0006139	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016787
GO:GO:0033897	GO:GO:0090502	InterPro:IPR036430	EnsemblPlantsGene:Os01g0897200	EnsemblPlants:Os01t0897200-01	PFAM:PF00445
ScanProsite:PS00530	PANTHER:PTHR11240	PANTHER:PTHR11240:SF37	UniProt:Q5N865	InterPro:RNase_T2-like	InterPro:RNase_T2-like_sf
InterPro:RNase_T2_His_AS_1	InterPro:Ribonuclease_T2_eukaryotic	SUPFAM:SSF55895	TMHMM:TMhelix	UniParc:UPI000049E9C0	SEG:seg

Description

RIBONUCLEASE 2Similar to Ribonuclease 2 precursor (EC 3.1.27.1). (Os01t0897200-01);Similar to Ribonuclease 2 precursor (EC 3.1.27.1). (Os01t0897200-02);Similar to Ribonuclease 2 precursor (EC 3.1.27.1). (Os01t0897200-04)

Coordinates

chr1:-:38990969..38993803

Molecular Weight (calculated)

31524.7 Da

IEP (calculated)

7.554

GRAVY (calculated)

-0.105

Length

284 amino acids

Sequence
(BLAST)

001: MATARKAPRM VAIWAVVVVV VAADLFGAAV ARSASARHAV GKKQREFDYF ALALQWPGTI CASTRHCCAI NGCCRSEPLQ TFTIHGLWPD YDDGTWPACC
101: RHTSFDMDKI LPLKPTLEKY WPSLYCSSSS TCFSGKGPFW AHESEKHGTC SSPVVKDELE YFTTALDLYF KYNVTEMLAS GGIHVSNGKQ YALTDVIDAI
201: KCAFGASPQI VCKKGSVEEL RLCFDKDLKP LDCLTTTATN ENVSKKKYCP RYITLPTYDP IVHANSTREI ITVESEVYGY LYTS

Best Arabidopsis Sequence Match ( AT2G39780.1 )
(BLAST)

001: MASRLCLLLL VACIAGAFAG DVIELNRSQR EFDYFALSLQ WPGTYCRGTR HCCSKNACCR GSDAPTQFTI HGLWPDYNDG SWPSCCYRSD FKEKEISTLM
101: DGLEKYWPSL SCGSPSSCNG GKGSFWGHEW EKHGTCSSPV FHDEYNYFLT TLNLYLKHNV TDVLYQAGYV ASNSEKYPLG GIVTAIQNAF HITPEVVCKR
201: DAIDEIRICF YKDFKPRDCV GSQDLTSRKS CPKYVSLPEY TPLDGEAMVL KMPTEREAL

Arabidopsis Description

RNS2Ribonuclease 2 [Source:UniProtKB/Swiss-Prot;Acc:P42814]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.