Factsheet for Os09t0538000-04

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 8
endoplasmic reticulum 6
vacuole 5
plasma membrane 5
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU1Hr1G093620.1	Barley	extracellular	61.78	63.49
TraesCS1A01G152600.1	Wheat	unclear	61.39	63.1
TraesCS1B01G170100.1	Wheat	endoplasmic reticulum, extracellular	62.16	62.89
TraesCS1D01G149700.1	Wheat	endoplasmic reticulum, extracellular	60.23	61.9
HORVU1Hr1G093570.1	Barley	vacuole	61.78	57.14
Zm00001d022630_P001	Maize	plastid	55.6	57.14
EER99263	Sorghum	extracellular	54.44	54.65
GSMUA_Achr4P08950_001	Banana	extracellular	38.61	41.49
Os09t0537700-02	Rice	extracellular	39.0	40.08
Os08t0434100-01	Rice	extracellular	27.41	31.0
Os07t0629300-00	Rice	cytosol	12.74	24.63
Os07t0629900-00	Rice	cytosol, extracellular	19.69	24.29
Os07t0630400-01	Rice	extracellular	23.17	23.44
Os01t0897300-01	Rice	extracellular	25.1	23.38
Os01t0897200-01	Rice	extracellular, vacuole	18.15	16.55

Protein Annotations

Gene3D:3.90.730.10	MapMan:35.1	EntrezGene:4347709	EMBL:AK059757	EMBL:AK061442	EMBL:AK104237
EMBL:AK104261	EMBL:AK104263	EMBL:AK104390	EMBL:AK104456	EMBL:AK104648	EMBL:AK109411
ProteinID:BAD34237.1	ProteinID:BAD34374.1	ProteinID:BAT09171.1	ProteinID:EAZ45498.1	GO:GO:0003674	GO:GO:0003676
GO:GO:0003723	GO:GO:0003824	GO:GO:0004518	GO:GO:0005488	GO:GO:0006139	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016787	GO:GO:0033897	GO:GO:0090502	InterPro:IPR036430
EnsemblPlantsGene:Os09g0538000	EnsemblPlants:Os09t0538000-04	PFAM:PF00445	PANTHER:PTHR11240	PANTHER:PTHR11240:SF23	UniProt:Q69JF4
InterPro:RNase_T2-like	InterPro:RNase_T2-like_sf	InterPro:Ribonuclease_T2_eukaryotic	SUPFAM:SSF55895	SignalP:SignalP-noTM	TMHMM:TMhelix
UniParc:UPI00003FF566	RefSeq:XP_015612645.1	SEG:seg	:	:	:

Description

RIBONUCLEASE 5Ribonuclease T2 family protein. (Os09t0538000-01);RNase S-like protein. (Os09t0538000-04);Non-protein coding transcript. (Os09t0538000-05)

Coordinates

chr9:-:21165219..21167647

Molecular Weight (calculated)

28438.2 Da

IEP (calculated)

7.802

GRAVY (calculated)

-0.018

Length

259 amino acids

Sequence
(BLAST)

001: MASGRIALLC LLGLLLVAAS PAAIAAKDDK IFYQITFMWP GAYCAQTKAG CCMPKTDVAP ASDFYVAGFT VYNATTNSSL SSCSNTPFDM NQIGDVTRLM
101: QYWNNIRCPS KSGQKGWKNA WETSGVCSDL TESAYFDTAL ALRDKINPLS RLVSNGIKPD FGLYSVKKIK EVIEEGIGAP ALIQCSKGPF NKFQLYQIYV
201: CVAEDAKTFV ECPSPRKPYT CGDDILFHPF KKWMLKTNST KSYAAADAID QLLEAVMEI

Best Arabidopsis Sequence Match ( AT1G14220.1 )
(BLAST)

001: MGAKGCVNVL LKLLVFQGLF VSRPQEDFDF FYFVLQWPGA YCDTSRACCY PTSGKPAADF GIHGLWPNYN GGSWPSNCDP DSQFDRSQIS DLVSSLKKNW
101: PTLSCPSNEG FNFWEHEWEK HGTCSESVMD QHEYFENALK LKQKANLLQI LKNSGINPDD GFYNLDKITN AIKDGIGFTP GIECNKDPER NAQLHQIYIC
201: VDTSGTEFIE CPVLPRGSCP SQIQFSKF

Arabidopsis Description

F7A19.32 protein [Source:UniProtKB/TrEMBL;Acc:Q9XI64]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.