CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 9
endoplasmic reticulum 5
vacuole 5
plasma membrane 5
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d022630_P001	Maize	plastid	79.07	80.95
TraesCS1A01G152600.1	Wheat	unclear	55.43	56.75
HORVU1Hr1G093620.1	Barley	extracellular	54.26	55.56
TraesCS1D01G149700.1	Wheat	endoplasmic reticulum, extracellular	54.26	55.56
TraesCS1B01G170100.1	Wheat	endoplasmic reticulum, extracellular	54.65	55.08
Os09t0538000-04	Rice	extracellular	54.65	54.44
HORVU1Hr1G093570.1	Barley	vacuole	54.26	50.0
GSMUA_Achr4P08950_001	Banana	extracellular	35.66	38.17
EER99262	Sorghum	extracellular	36.43	37.75
EES15044	Sorghum	extracellular	27.91	32.0
EER97591	Sorghum	extracellular	22.48	23.11
KXG33898	Sorghum	extracellular, plasma membrane	24.81	20.98
OQU88033	Sorghum	endoplasmic reticulum, extracellular, vacuole	21.32	19.93
OQU90314	Sorghum	extracellular	15.89	18.22
OQU81225	Sorghum	cytosol	6.2	13.01

Protein Annotations

Gene3D:3.90.730.10	MapMan:35.1	EntrezGene:8070909	UniProt:C5X6V0	EnsemblPlants:EER99263	ProteinID:EER99263
ProteinID:EER99263.1	GO:GO:0003674	GO:GO:0003676	GO:GO:0003723	GO:GO:0003824	GO:GO:0004518
GO:GO:0005488	GO:GO:0006139	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016787
GO:GO:0033897	GO:GO:0090502	InterPro:IPR036430	PFAM:PF00445	PANTHER:PTHR11240	PANTHER:PTHR11240:SF23
InterPro:RNase_T2-like	InterPro:RNase_T2-like_sf	InterPro:Ribonuclease_T2_eukaryotic	EnsemblPlantsGene:SORBI_3002G278800	SUPFAM:SSF55895	unigene:Sbi.14060
SignalP:SignalP-noTM	UniParc:UPI0001A83D86	RefSeq:XP_002462742.1	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr2:-:66074257..66076549

Molecular Weight (calculated)

28450.0 Da

IEP (calculated)

7.798

GRAVY (calculated)

-0.148

Length

258 amino acids

Sequence
(BLAST)

001: MASSRIPLLC LLGLLLVASP AIADDSSGIY YQLALLWPGA YCEQTNAGCC KPTTGVSPAR DFYITGLTVY NATTNAALTE CSNQAPYNPN LITGIGLEQY
101: WINIKCPANN GQRSWKNAWK KAGACSGLDE KAYFEKALSF RSKINPLVRL KQNGIEDDFE LYGLKAIKKV FKSGINAEPV IQCSKGPFDK YMLYQLYFCA
201: NGNGTFIDCP APAKYTCSNS VLFHPYKKWM LKQQLSDESA DFYDSADPFV LPGLAMDN

Best Arabidopsis Sequence Match ( AT1G14220.1 )
(BLAST)

001: MGAKGCVNVL LKLLVFQGLF VSRPQEDFDF FYFVLQWPGA YCDTSRACCY PTSGKPAADF GIHGLWPNYN GGSWPSNCDP DSQFDRSQIS DLVSSLKKNW
101: PTLSCPSNEG FNFWEHEWEK HGTCSESVMD QHEYFENALK LKQKANLLQI LKNSGINPDD GFYNLDKITN AIKDGIGFTP GIECNKDPER NAQLHQIYIC
201: VDTSGTEFIE CPVLPRGSCP SQIQFSKF

Arabidopsis Description

F7A19.32 protein [Source:UniProtKB/TrEMBL;Acc:Q9XI64]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.