Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 9
- endoplasmic reticulum 5
- vacuole 6
- plasma membrane 5
- golgi 5
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT2G02990.1 | EER87676 | AT1G01010.1 | 21798944 |
| AT2G02990.1 | EES12559 | AT3G60600.1 | 21798944 |
| AT2G02990.1 | EES14570 | AT3G60600.1 | 21798944 |
| AT2G02990.1 | KXG31128 | AT3G60600.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d032186_P001 | Maize | extracellular | 94.22 | 92.58 |
| TraesCS6D01G320200.1 | Wheat | extracellular | 79.56 | 78.51 |
| TraesCS6A01G339600.1 | Wheat | extracellular | 79.56 | 78.51 |
| TraesCS6B01G370600.1 | Wheat | extracellular | 79.11 | 78.07 |
| HORVU6Hr1G081930.1 | Barley | cytosol | 26.22 | 77.63 |
| Os08t0434100-01 | Rice | extracellular | 77.78 | 76.42 |
| TraesCS2D01G260000.1 | Wheat | extracellular | 76.44 | 74.78 |
| TraesCS2B01G278200.1 | Wheat | extracellular | 76.0 | 74.35 |
| TraesCS2A01G264000.1 | Wheat | extracellular | 75.56 | 73.91 |
| HORVU0Hr1G017230.3 | Barley | extracellular | 74.67 | 73.36 |
| HORVU2Hr1G062880.3 | Barley | plastid | 76.89 | 65.78 |
| GSMUA_Achr5P23330_001 | Banana | extracellular | 62.67 | 62.11 |
| HORVU6Hr1G081950.3 | Barley | extracellular | 53.33 | 59.11 |
| KRH70736 | Soybean | extracellular | 59.56 | 59.03 |
| GSMUA_Achr7P21030_001 | Banana | extracellular | 57.78 | 58.56 |
| KRG89631 | Soybean | endoplasmic reticulum, extracellular | 57.78 | 57.27 |
| CDY62181 | Canola | extracellular | 57.78 | 56.77 |
| KRH74869 | Soybean | endoplasmic reticulum, extracellular, plasma membrane | 60.0 | 56.72 |
| AT2G02990.1 | Thale cress | extracellular | 57.78 | 56.52 |
| Bra024795.1-P | Field mustard | extracellular | 57.33 | 56.33 |
| Bra026570.1-P | Field mustard | extracellular | 57.33 | 56.33 |
| CDY45186 | Canola | extracellular | 57.33 | 56.33 |
| CDY09344 | Canola | extracellular | 57.78 | 56.03 |
| CDY03023 | Canola | extracellular | 56.89 | 55.9 |
| GSMUA_Achr4P00460_001 | Banana | endoplasmic reticulum, extracellular, plastid | 55.11 | 46.97 |
| EER97591 | Sorghum | extracellular | 42.67 | 38.25 |
| EER99262 | Sorghum | extracellular | 34.22 | 30.92 |
| OQU90314 | Sorghum | extracellular | 29.33 | 29.33 |
| OQU88033 | Sorghum | endoplasmic reticulum, extracellular, vacuole | 34.67 | 28.26 |
| EER99263 | Sorghum | extracellular | 32.0 | 27.91 |
| KXG33898 | Sorghum | extracellular, plasma membrane | 32.44 | 23.93 |
| OQU81225 | Sorghum | cytosol | 9.33 | 17.07 |
Protein Annotations
| Gene3D:3.90.730.10 | MapMan:35.1 | EntrezGene:8077825 | UniProt:C5YL90 | EnsemblPlants:EES15044 | ProteinID:EES15044 |
| ProteinID:EES15044.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003723 | GO:GO:0003824 | GO:GO:0004518 |
| GO:GO:0004540 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005576 | GO:GO:0005618 | GO:GO:0005623 |
| GO:GO:0005886 | GO:GO:0006139 | GO:GO:0006950 | GO:GO:0007154 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009605 | GO:GO:0009611 | GO:GO:0009718 | GO:GO:0009987 | GO:GO:0009991 |
| GO:GO:0016020 | GO:GO:0016036 | GO:GO:0016787 | GO:GO:0030312 | GO:GO:0033897 | GO:GO:0090502 |
| InterPro:IPR036430 | PFAM:PF00445 | ScanProsite:PS00530 | ScanProsite:PS00531 | PANTHER:PTHR11240 | PANTHER:PTHR11240:SF35 |
| InterPro:RNase_T2-like | InterPro:RNase_T2-like_sf | InterPro:RNase_T2_His_AS_1 | InterPro:RNase_T2_His_AS_2 | InterPro:Ribonuclease_T2_eukaryotic | EnsemblPlantsGene:SORBI_3007G137700 |
| SUPFAM:SSF55895 | SignalP:SignalP-noTM | UniParc:UPI0001A87B89 | RefSeq:XP_002445549.1 | SEG:seg | : |
Description
hypothetical protein
Coordinates
chr7:-:56571473..56573346
Molecular Weight (calculated)
24558.7 Da
IEP (calculated)
5.241
GRAVY (calculated)
-0.245
Length
225 amino acids
Sequence
(BLAST)
(BLAST)
001: MAARLSLLLA VLAVAAGRAA AQDYDFFYLV LQWPGSYCDT KQSCCYPKSG KPAADFGIHG LWPNRDDGTY PQNCSPDNAF NPSKVSDLLS SLRAKWPTLA
101: CPSNDGLRFW GHEWEKHGTC AANVFDEHGY FQAAMRLRDQ LGVLAALSSA GVNPDGGYYS LSQIKGAISQ GTGFEPYVEC NRDEAGNSQL YQLYFCVDAA
201: GDSFVECPVL PRGRPCGNRI EFPAF
101: CPSNDGLRFW GHEWEKHGTC AANVFDEHGY FQAAMRLRDQ LGVLAALSSA GVNPDGGYYS LSQIKGAISQ GTGFEPYVEC NRDEAGNSQL YQLYFCVDAA
201: GDSFVECPVL PRGRPCGNRI EFPAF
001: MKILLASLCL ISLLVILPSV FSASSSSEDF DFFYFVQQWP GSYCDTQKKC CYPNSGKPAA DFGIHGLWPN YKDGTYPSNC DASKPFDSST ISDLLTSMKK
101: SWPTLACPSG SGEAFWEHEW EKHGTCSESV IDQHEYFQTA LNLKQKTNLL GALTKAGINP DGKSYSLESI RDSIKESIGF TPWVECNRDG SGNSQLYQVY
201: LCVDRSGSGL IECPVFPHGK CGAEIEFPSF
101: SWPTLACPSG SGEAFWEHEW EKHGTCSESV IDQHEYFQTA LNLKQKTNLL GALTKAGINP DGKSYSLESI RDSIKESIGF TPWVECNRDG SGNSQLYQVY
201: LCVDRSGSGL IECPVFPHGK CGAEIEFPSF
Arabidopsis Description
RNS1Ribonuclease 1 [Source:UniProtKB/Swiss-Prot;Acc:P42813]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.