CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 7
endoplasmic reticulum 6
vacuole 5
plasma membrane 5
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2D01G163100.1	Wheat	extracellular	54.22	52.36
TraesCS2A01G157300.1	Wheat	extracellular	55.56	48.45
EER97591	Sorghum	extracellular	38.22	34.26
EES15044	Sorghum	extracellular	29.33	29.33
EER99262	Sorghum	extracellular	23.56	21.29
OQU88033	Sorghum	endoplasmic reticulum, extracellular, vacuole	20.89	17.03
EER99263	Sorghum	extracellular	18.22	15.89
KXG33898	Sorghum	extracellular, plasma membrane	20.0	14.75
OQU81225	Sorghum	cytosol	3.56	6.5

Protein Annotations

Gene3D:3.90.730.10	MapMan:35.1	UniProt:A0A1W0W7D8	GO:GO:0003674	GO:GO:0003676	GO:GO:0003723
GO:GO:0003824	GO:GO:0004518	GO:GO:0005488	GO:GO:0006139	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016787	GO:GO:0033897	GO:GO:0090502	InterPro:IPR036430	EnsemblPlants:OQU90314
ProteinID:OQU90314	ProteinID:OQU90314.1	PFAM:PF00445	ScanProsite:PS00531	PANTHER:PTHR11240	PANTHER:PTHR11240:SF18
InterPro:RNase_T2-like	InterPro:RNase_T2-like_sf	InterPro:RNase_T2_His_AS_2	EnsemblPlantsGene:SORBI_3002G385601	SUPFAM:SSF55895	SignalP:SignalP-noTM
TMHMM:TMhelix	UniParc:UPI0009DC8F51	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr2:+:74037078..74038123

Molecular Weight (calculated)

25228.9 Da

IEP (calculated)

7.736

GRAVY (calculated)

-0.195

Length

225 amino acids

Sequence
(BLAST)

001: MALHCPLAVV AVLLLPLVAA SAATDFDFFH HVQQTSCWPD SCNATAPLDL SQIRDLDSDL RRNWGTLSCK NRNNTQFWSH EWSRHGTCSN MDQHSYFLAA
101: LELKARFNLT RILLDAGVVP SDDKQYCLRS IRDAVAAATG SAPMLECNRN GRNETQLYQV FQCVGLDGRT SSTAHRRSTA GAPTWSSSHR SKHLVLLICL
201: NEAELNFSFE PLCFRHLHLA KIQPF

Best Arabidopsis Sequence Match ( AT2G02990.1 )
(BLAST)

001: MKILLASLCL ISLLVILPSV FSASSSSEDF DFFYFVQQWP GSYCDTQKKC CYPNSGKPAA DFGIHGLWPN YKDGTYPSNC DASKPFDSST ISDLLTSMKK
101: SWPTLACPSG SGEAFWEHEW EKHGTCSESV IDQHEYFQTA LNLKQKTNLL GALTKAGINP DGKSYSLESI RDSIKESIGF TPWVECNRDG SGNSQLYQVY
201: LCVDRSGSGL IECPVFPHGK CGAEIEFPSF

Arabidopsis Description

RNS1Ribonuclease 1 [Source:UniProtKB/Swiss-Prot;Acc:P42813]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.