Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, extracellular, vacuole
Predictor Summary:
Predictor Summary:
- extracellular 6
- endoplasmic reticulum 6
- vacuole 6
- plasma membrane 5
- golgi 5
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3A01G398300.1 | Wheat | endoplasmic reticulum, extracellular | 69.57 | 73.56 |
| TraesCS3B01G430300.1 | Wheat | unclear | 72.83 | 72.04 |
| TraesCS3D01G392300.1 | Wheat | extracellular | 72.1 | 70.82 |
| HORVU3Hr1G089580.5 | Barley | cytosol, extracellular | 73.91 | 66.45 |
| OQU81225 | Sorghum | cytosol | 25.72 | 57.72 |
| Zm00001d042512_P006 | Maize | endoplasmic reticulum, extracellular, vacuole | 67.39 | 52.1 |
| HORVU6Hr1G017960.3 | Barley | plastid | 31.88 | 50.57 |
| GSMUA_Achr7P23750_001 | Banana | mitochondrion | 52.17 | 48.0 |
| KRH47963 | Soybean | nucleus | 46.01 | 47.04 |
| AT2G39780.1 | Thale cress | extracellular | 43.84 | 46.72 |
| CDY60490 | Canola | extracellular, plasma membrane, vacuole | 42.75 | 46.09 |
| KRH06524 | Soybean | extracellular | 44.2 | 45.35 |
| CDY39709 | Canola | extracellular | 42.75 | 44.53 |
| Bra032671.1-P | Field mustard | extracellular | 42.75 | 44.53 |
| KXG33898 | Sorghum | extracellular, plasma membrane | 48.91 | 44.26 |
| Solyc09g020110.2.1 | Tomato | plastid | 40.22 | 42.69 |
| Solyc06g082890.2.1 | Tomato | extracellular, plasma membrane | 42.03 | 42.03 |
| EES15044 | Sorghum | extracellular | 28.26 | 34.67 |
| PGSC0003DMT400071177 | Potato | cytosol, nucleus, peroxisome | 28.62 | 33.05 |
| VIT_00s1339g00010.t01 | Wine grape | cytosol | 12.32 | 32.69 |
| EER97591 | Sorghum | extracellular | 24.28 | 26.69 |
| EER99262 | Sorghum | extracellular | 19.93 | 22.09 |
| EER99263 | Sorghum | extracellular | 19.93 | 21.32 |
| OQU90314 | Sorghum | extracellular | 17.03 | 20.89 |
Protein Annotations
| Gene3D:3.90.730.10 | MapMan:35.1 | UniProt:A0A1W0W0Z8 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003723 |
| GO:GO:0003824 | GO:GO:0004518 | GO:GO:0005488 | GO:GO:0006139 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009987 | GO:GO:0016787 | GO:GO:0033897 | GO:GO:0090502 | InterPro:IPR036430 | EnsemblPlants:OQU88033 |
| ProteinID:OQU88033 | ProteinID:OQU88033.1 | PFAM:PF00445 | ScanProsite:PS00530 | PANTHER:PTHR11240 | PANTHER:PTHR11240:SF37 |
| InterPro:RNase_T2-like | InterPro:RNase_T2-like_sf | InterPro:RNase_T2_His_AS_1 | InterPro:Ribonuclease_T2_eukaryotic | EnsemblPlantsGene:SORBI_3003G388251 | SUPFAM:SSF55895 |
| SignalP:SignalP-noTM | TMHMM:TMhelix | UniParc:UPI0009DC8909 | SEG:seg | : | : |
Description
hypothetical protein
Coordinates
chr3:-:69961489..69963791
Molecular Weight (calculated)
30536.5 Da
IEP (calculated)
6.993
GRAVY (calculated)
-0.071
Length
276 amino acids
Sequence
(BLAST)
(BLAST)
001: MTTARKAACV LAAWVLVAAA LSDLGSARAP LGSKPQREFD YFALSLQWPG TICASTRHCC ASNGCCRSEP LQTFTIHGLW PDYDDGTWPS CCRRTQFELD
101: KILPLMEVLN KYWPSLYCSK SGTCFSGKGL FWAHEKHGTC SAPVVQDELQ YFTIALDLYF KYNVTEMLSS GGIQVSNGKE YALSDVIDTI KHAFGGSPQI
201: VCKNGSVQEL RLCFDKELKP RDCLTTSLTN GSVSKSKHCP RYITLPTYDP LVLANSTVEI MSQFDEFVVP TALYTA
101: KILPLMEVLN KYWPSLYCSK SGTCFSGKGL FWAHEKHGTC SAPVVQDELQ YFTIALDLYF KYNVTEMLSS GGIQVSNGKE YALSDVIDTI KHAFGGSPQI
201: VCKNGSVQEL RLCFDKELKP RDCLTTSLTN GSVSKSKHCP RYITLPTYDP LVLANSTVEI MSQFDEFVVP TALYTA
001: MASRLCLLLL VACIAGAFAG DVIELNRSQR EFDYFALSLQ WPGTYCRGTR HCCSKNACCR GSDAPTQFTI HGLWPDYNDG SWPSCCYRSD FKEKEISTLM
101: DGLEKYWPSL SCGSPSSCNG GKGSFWGHEW EKHGTCSSPV FHDEYNYFLT TLNLYLKHNV TDVLYQAGYV ASNSEKYPLG GIVTAIQNAF HITPEVVCKR
201: DAIDEIRICF YKDFKPRDCV GSQDLTSRKS CPKYVSLPEY TPLDGEAMVL KMPTEREAL
101: DGLEKYWPSL SCGSPSSCNG GKGSFWGHEW EKHGTCSSPV FHDEYNYFLT TLNLYLKHNV TDVLYQAGYV ASNSEKYPLG GIVTAIQNAF HITPEVVCKR
201: DAIDEIRICF YKDFKPRDCV GSQDLTSRKS CPKYVSLPEY TPLDGEAMVL KMPTEREAL
Arabidopsis Description
RNS2Ribonuclease 2 [Source:UniProtKB/Swiss-Prot;Acc:P42814]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.