Factsheet for HORVU3Hr1G089580.5

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, cytosol

Predictor Summary:

cytosol 1
extracellular 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, extracellular
Any Predictor:	cytosol, extracellular
MultiLoc:	cytosol
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3B01G430300.1	Wheat	unclear	84.36	92.83
TraesCS3A01G398300.1	Wheat	endoplasmic reticulum, extracellular	78.18	91.95
TraesCS3D01G392300.1	Wheat	extracellular	82.74	90.39
OQU88033	Sorghum	endoplasmic reticulum, extracellular, vacuole	66.45	73.91
HORVU6Hr1G017960.3	Barley	plastid	36.48	64.37
Os01t0897200-01	Rice	extracellular, vacuole	52.77	57.04
GSMUA_Achr7P23750_001	Banana	mitochondrion	47.23	48.33
KRH47963	Soybean	nucleus	41.37	47.04
HORVU3Hr1G089550.5	Barley	endoplasmic reticulum, extracellular, vacuole	43.32	47.0
KRH06524	Soybean	extracellular	39.74	45.35
CDY60490	Canola	extracellular, plasma membrane, vacuole	37.78	45.31
AT2G39780.1	Thale cress	extracellular	38.11	45.17
Bra032671.1-P	Field mustard	extracellular	37.78	43.77
CDY39709	Canola	extracellular	37.78	43.77
Solyc09g020110.2.1	Tomato	plastid	35.18	41.54
Solyc06g082890.2.1	Tomato	extracellular, plasma membrane	36.16	40.22
Zm00001d042512_P006	Maize	endoplasmic reticulum, extracellular, vacuole	46.58	40.06
HORVU2Hr1G028430.1	Barley	extracellular	25.08	32.08
HORVU0Hr1G017230.3	Barley	extracellular	23.78	31.88
PGSC0003DMT400071177	Potato	cytosol, nucleus, peroxisome	24.76	31.8
VIT_00s1339g00010.t01	Wine grape	cytosol	10.42	30.77
HORVU6Hr1G081950.3	Barley	extracellular	20.2	30.54
HORVU2Hr1G062880.3	Barley	plastid	25.41	29.66
HORVU1Hr1G093560.1	Barley	extracellular	18.57	23.27
HORVU1Hr1G093780.1	Barley	vacuole	18.24	22.86
HORVU2Hr1G037400.1	Barley	extracellular	13.03	22.86
HORVU1Hr1G093660.11	Barley	extracellular	18.57	22.8
HORVU1Hr1G093670.1	Barley	cytosol	15.64	21.72
HORVU6Hr1G081930.1	Barley	cytosol	5.21	21.05
HORVU1Hr1G093620.1	Barley	extracellular	16.94	20.63
HORVU1Hr1G093570.1	Barley	vacuole	17.26	18.93

Protein Annotations

Gene3D:3.90.730.10	MapMan:35.1	UniProt:A0A287M780	GO:GO:0003674	GO:GO:0003676	GO:GO:0003723
GO:GO:0003824	GO:GO:0004518	GO:GO:0005488	GO:GO:0006139	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016787	GO:GO:0033897	GO:GO:0090502	EnsemblPlantsGene:HORVU3Hr1G089580	EnsemblPlants:HORVU3Hr1G089580.5
InterPro:IPR036430	PFAM:PF00445	ScanProsite:PS00530	PANTHER:PTHR11240	PANTHER:PTHR11240:SF37	InterPro:RNase_T2-like
InterPro:RNase_T2-like_sf	InterPro:RNase_T2_His_AS_1	InterPro:Ribonuclease_T2_eukaryotic	SUPFAM:SSF55895	TMHMM:TMhelix	UniParc:UPI000B48565D
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chrchr3H:+:629154100..629157076

Molecular Weight (calculated)

33399.7 Da

IEP (calculated)

7.320

GRAVY (calculated)

-0.142

Length

307 amino acids

Sequence
(BLAST)

001: VCTTLGSETT THPAARGKGG EGDTAAGGEA MATTTCLLAA WALVAAGLFG TGLARASFAP AAVGKEQREF DYFALALQWP GTICSSTRHC CAVNGCCRKE
101: PLHTFTIHGL WPDYDDGTWP SCCRRTSFDM DKITPLKPTL DKYWPSLYCS SSSTCFSGRG PFWAHEVEKH GTCSAPAVRE ELQYFSTALD LYFKYNVTEM
201: LATGDILVSN GKEYALSDVI DTIKHAFGGS PQIICKKGSV QELRLCFTKD LKPRDCLTTS AMYKNLSKSK HCPRKISLPT YDPIVLANST LEIVPEASAN
301: GLYFFTS

Best Arabidopsis Sequence Match ( AT2G39780.1 )
(BLAST)

001: MASRLCLLLL VACIAGAFAG DVIELNRSQR EFDYFALSLQ WPGTYCRGTR HCCSKNACCR GSDAPTQFTI HGLWPDYNDG SWPSCCYRSD FKEKEISTLM
101: DGLEKYWPSL SCGSPSSCNG GKGSFWGHEW EKHGTCSSPV FHDEYNYFLT TLNLYLKHNV TDVLYQAGYV ASNSEKYPLG GIVTAIQNAF HITPEVVCKR
201: DAIDEIRICF YKDFKPRDCV GSQDLTSRKS CPKYVSLPEY TPLDGEAMVL KMPTEREAL

Arabidopsis Description

RNS2Ribonuclease 2 [Source:UniProtKB/Swiss-Prot;Acc:P42814]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.