Factsheet for HORVU3Hr1G089550.5

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, extracellular, vacuole

Predictor Summary:

extracellular 3
endoplasmic reticulum 3
vacuole 3
plasma membrane 2
golgi 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, extracellular, vacuole
Any Predictor:	mitochondrion, secretory
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Predotar:	secretory
TargetP:	mitochondrion
WoLF PSORT:	vacuole
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3A01G398200.1	Wheat	endoplasmic reticulum, extracellular, vacuole	91.87	91.87
TraesCS3B01G430200.1	Wheat	endoplasmic reticulum, extracellular, mitochondrion	91.52	91.52
TraesCS3D01G392200.1	Wheat	endoplasmic reticulum, extracellular, vacuole	87.63	87.63
KXG33898	Sorghum	extracellular, plasma membrane	71.02	65.9
Os01t0897300-01	Rice	extracellular	64.66	65.83
Zm00001d042511_P005	Maize	golgi, mitochondrion, plasma membrane	61.48	49.29
CDY60490	Canola	extracellular, plasma membrane, vacuole	39.93	44.14
AT2G39780.1	Thale cress	extracellular	39.93	43.63
GSMUA_Achr7P23750_001	Banana	mitochondrion	45.94	43.33
HORVU3Hr1G089580.5	Barley	cytosol, extracellular	47.0	43.32
HORVU6Hr1G017960.3	Barley	plastid	25.8	41.95
Bra032671.1-P	Field mustard	extracellular	39.22	41.89
CDY39709	Canola	extracellular	39.22	41.89
KRH47963	Soybean	nucleus	39.58	41.48
Solyc09g020110.2.1	Tomato	plastid	37.81	41.15
KRH06524	Soybean	extracellular	38.52	40.52
Solyc06g082890.2.1	Tomato	extracellular, plasma membrane	37.1	38.04
VIT_00s1339g00010.t01	Wine grape	cytosol	12.37	33.65
PGSC0003DMT400071177	Potato	cytosol, nucleus, peroxisome	26.15	30.96
HORVU2Hr1G028430.1	Barley	extracellular	26.15	30.83
HORVU2Hr1G062880.3	Barley	plastid	27.21	29.28
HORVU0Hr1G017230.3	Barley	extracellular	22.97	28.38
HORVU6Hr1G081950.3	Barley	extracellular	19.79	27.59
HORVU1Hr1G093780.1	Barley	vacuole	20.85	24.08
HORVU1Hr1G093560.1	Barley	extracellular	20.85	24.08
HORVU1Hr1G093660.11	Barley	extracellular	20.85	23.6
HORVU1Hr1G093670.1	Barley	cytosol	18.37	23.53
HORVU1Hr1G093620.1	Barley	extracellular	19.43	21.83
HORVU2Hr1G037400.1	Barley	extracellular	12.72	20.57
HORVU6Hr1G081930.1	Barley	cytosol	5.3	19.74
HORVU1Hr1G093570.1	Barley	vacuole	19.43	19.64

Protein Annotations

Gene3D:3.90.730.10	MapMan:35.1	UniProt:A0A287M782	GO:GO:0003674	GO:GO:0003676	GO:GO:0003723
GO:GO:0003824	GO:GO:0004518	GO:GO:0005488	GO:GO:0006139	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016787	GO:GO:0033897	GO:GO:0090502	EnsemblPlantsGene:HORVU3Hr1G089550	EnsemblPlants:HORVU3Hr1G089550.5
InterPro:IPR036430	PFAM:PF00445	ScanProsite:PS00530	PANTHER:PTHR11240	PANTHER:PTHR11240:SF37	InterPro:RNase_T2-like
InterPro:RNase_T2-like_sf	InterPro:RNase_T2_His_AS_1	InterPro:Ribonuclease_T2_eukaryotic	SUPFAM:SSF55895	SignalP:SignalP-noTM	TMHMM:TMhelix
UniParc:UPI000B48086B	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chrchr3H:+:629144899..629147406

Molecular Weight (calculated)

32182.3 Da

IEP (calculated)

8.972

GRAVY (calculated)

-0.429

Length

283 amino acids

Sequence
(BLAST)

001: MDRTRRGRRL LVPLCFLCLA VLLPGALLAS PAAGMKRRQA GFDYYVLALQ WPGSVCRQTN HCCSSNGCCR SNPLNWFTIH GLWPQYSYGG WPSCCRPTTT
101: FNMNKIAMLR PILERYWPSL YCGDTSTCFG GRGPFWAHES ATHGTCGYPE IQDEYDYFST ALYLYSKYNV TKALRKAHIY PRNGRKYAVA HIVAAIDHAF
201: GRLPHLVCKN GSLQELRLCF HKDYQPRDCG SEEDDAWSSS RRSHCPRYVN LPSYLQSALG NATEVRLRNA AENERRAHGQ SYV

Best Arabidopsis Sequence Match ( AT2G39780.2 )
(BLAST)

001: MASRLCLLLL VACIAGAFAG DVIELNRSQR EFDYFALSLQ WPGTYCRGTR HCCSKNACCR GSDAPTQFTI HGLWPDYNDG SWPSCCYRSD FKEKEISTLM
101: DGLEKYWPSL SCGSPSSCNG GKGSFWGHED VLYQAGYVAS NSEKYPLGGI VTAIQNAFHI TPEVVCKRDA IDEIRICFYK DFKPRDCVGS QDLTSRKSCP
201: KYVSLPEYTP LDGEAMVLKM PTEREAL

Arabidopsis Description

RNS2Ribonuclease 2 [Source:UniProtKB/Swiss-Prot;Acc:P42814]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.