Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 4
- endoplasmic reticulum 2
- vacuole 2
- plasma membrane 2
- golgi 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU2Hr1G028430.1 | Barley | extracellular | 30.86 | 22.5 |
| Os07t0629300-00 | Rice | cytosol | 16.57 | 21.64 |
| HORVU6Hr1G081950.3 | Barley | extracellular | 24.57 | 21.18 |
| HORVU0Hr1G017230.3 | Barley | extracellular | 24.57 | 18.78 |
| HORVU2Hr1G062880.3 | Barley | plastid | 28.0 | 18.63 |
| Os07t0629900-00 | Rice | cytosol, extracellular | 18.86 | 15.71 |
| HORVU6Hr1G017960.3 | Barley | plastid | 13.14 | 13.22 |
| HORVU3Hr1G089580.5 | Barley | cytosol, extracellular | 22.86 | 13.03 |
| HORVU1Hr1G093660.11 | Barley | extracellular | 18.29 | 12.8 |
| HORVU3Hr1G089550.5 | Barley | endoplasmic reticulum, extracellular, vacuole | 20.57 | 12.72 |
| HORVU1Hr1G093560.1 | Barley | extracellular | 17.71 | 12.65 |
| HORVU1Hr1G093780.1 | Barley | vacuole | 17.71 | 12.65 |
| HORVU1Hr1G093620.1 | Barley | extracellular | 16.57 | 11.51 |
| HORVU1Hr1G093670.1 | Barley | cytosol | 13.14 | 10.41 |
| HORVU1Hr1G093570.1 | Barley | vacuole | 16.57 | 10.36 |
| HORVU6Hr1G081930.1 | Barley | cytosol | 4.0 | 9.21 |
Protein Annotations
| Gene3D:3.90.730.10 | MapMan:35.1 | UniProt:A0A287HQR9 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003723 |
| GO:GO:0003824 | GO:GO:0004518 | GO:GO:0005488 | GO:GO:0006139 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009987 | GO:GO:0016787 | GO:GO:0033897 | GO:GO:0090502 | EnsemblPlantsGene:HORVU2Hr1G037400 | EnsemblPlants:HORVU2Hr1G037400.1 |
| InterPro:IPR036430 | PFAM:PF00445 | PANTHER:PTHR11240 | PANTHER:PTHR11240:SF18 | InterPro:RNase_T2-like | InterPro:RNase_T2-like_sf |
| SUPFAM:SSF55895 | SignalP:SignalP-noTM | UniParc:UPI000B487969 | SEG:seg | : | : |
Description
No Description!
Coordinates
chrchr2H:-:170855095..170855968
Molecular Weight (calculated)
18856.9 Da
IEP (calculated)
7.978
GRAVY (calculated)
0.153
Length
175 amino acids
Sequence
(BLAST)
(BLAST)
001: KKLVVLSVLV LLSLVVVSSA EEFDFFYLVP QWPGSFCDTK TGWCFPGTGK PVTDFGIHGM WPNYSKCKTQ GVLDGVIEMV TKGKKKCRPE FGIHGMWPLQ
101: LWEKGPAEGD GRQLAGARVQ GREEHPVLDP RVGEVLNMYF SAATAAYHLQ AVAAAAVAAL TLATTAATAI PLHAA
101: LWEKGPAEGD GRQLAGARVQ GREEHPVLDP RVGEVLNMYF SAATAAYHLQ AVAAAAVAAL TLATTAATAI PLHAA
001: MKILLASLCL ISLLVILPSV FSASSSSEDF DFFYFVQQWP GSYCDTQKKC CYPNSGKPAA DFGIHGLWPN YKDGTYPSNC DASKPFDSST ISDLLTSMKK
101: SWPTLACPSG SGEAFWEHEW EKHGTCSESV IDQHEYFQTA LNLKQKTNLL GALTKAGINP DGKSYSLESI RDSIKESIGF TPWVECNRDG SGNSQLYQVY
201: LCVDRSGSGL IECPVFPHGK CGAEIEFPSF
101: SWPTLACPSG SGEAFWEHEW EKHGTCSESV IDQHEYFQTA LNLKQKTNLL GALTKAGINP DGKSYSLESI RDSIKESIGF TPWVECNRDG SGNSQLYQVY
201: LCVDRSGSGL IECPVFPHGK CGAEIEFPSF
Arabidopsis Description
RNS1Ribonuclease 1 [Source:UniProtKB/Swiss-Prot;Acc:P42813]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.