Factsheet for HORVU1Hr1G093570.1

Subcellular Localization

min:

: max

Winner_takes_all: vacuole

Predictor Summary:

mitochondrion 1
golgi 1
extracellular 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	vacuole
Any Predictor:	extracellular, golgi, mitochondrion
iPSORT:	mitochondrion
MultiLoc:	golgi
YLoc:	extracellular

vacuole: 16581873

msms PMID: 16581873 doi

A Endler, S Meyer, S Schelbert, T Schneider, W Weschke, SW Peters, F Keller, S Baginsky, E Martinoia, UG Schmidt

University of Zurich, Institute of Plant Biology, CH-8008 Zurich, Switzerland.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU1Hr1G093620.1	Barley	extracellular	90.0	100.0
TraesCS1D01G149700.1	Wheat	endoplasmic reticulum, extracellular	84.29	93.65
TraesCS1B01G170100.1	Wheat	endoplasmic reticulum, extracellular	84.64	92.58
TraesCS1A01G152600.1	Wheat	unclear	82.86	92.06
Os09t0538000-04	Rice	extracellular	57.14	61.78
Zm00001d022630_P001	Maize	plastid	51.43	57.14
EER99263	Sorghum	extracellular	50.0	54.26
GSMUA_Achr4P08950_001	Banana	extracellular	38.57	44.81
HORVU1Hr1G093670.1	Barley	cytosol	35.36	44.8
HORVU1Hr1G093560.1	Barley	extracellular	38.21	43.67
HORVU1Hr1G093780.1	Barley	vacuole	37.86	43.27
HORVU1Hr1G093660.11	Barley	extracellular	37.86	42.4
HORVU6Hr1G081930.1	Barley	cytosol	9.64	35.53
HORVU0Hr1G017230.3	Barley	extracellular	22.5	27.51
HORVU2Hr1G062880.3	Barley	plastid	25.71	27.38
HORVU2Hr1G028430.1	Barley	extracellular	23.21	27.08
HORVU6Hr1G081950.3	Barley	extracellular	15.0	20.69
HORVU3Hr1G089550.5	Barley	endoplasmic reticulum, extracellular, vacuole	19.64	19.43
HORVU3Hr1G089580.5	Barley	cytosol, extracellular	18.93	17.26
HORVU2Hr1G037400.1	Barley	extracellular	10.36	16.57
HORVU6Hr1G017960.3	Barley	plastid	9.29	14.94

Protein Annotations

Gene3D:3.90.730.10	MapMan:35.1	UniProt:A0A287GSK3	GO:GO:0003674	GO:GO:0003676	GO:GO:0003723
GO:GO:0003824	GO:GO:0004518	GO:GO:0005488	GO:GO:0005575	GO:GO:0006139	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016787	GO:GO:0033897
GO:GO:0090502	EnsemblPlantsGene:HORVU1Hr1G093570	EnsemblPlants:HORVU1Hr1G093570.1	InterPro:IPR036430	PFAM:PF00445	PANTHER:PTHR11240
PANTHER:PTHR11240:SF23	InterPro:RNase_T2-like	InterPro:RNase_T2-like_sf	InterPro:Ribonuclease_T2_eukaryotic	SUPFAM:SSF55895	TMHMM:TMhelix
UniParc:UPI000B46E33B	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chrchr1H:+:553490631..553492328

Molecular Weight (calculated)

30466.0 Da

IEP (calculated)

8.466

GRAVY (calculated)

0.125

Length

280 amino acids

Sequence
(BLAST)

001: VLTKALLGVQ ISALVRNVER SEIKQGFGMA FRRALLCLLG MLIASSAIAV SDSGIYYQIG LMWPGAYCVQ TTGGCCMPKS PIVPAADFYV SGFTVFNATT
101: DAPETSCSST PFNSDEILEI SGLRQYWSNI KCPSNNGQKS WKSAWKTSGV CSGLDDKAYF QAAIALRSKI NPLSRLVSKG IKPDFGLYSL EKIKKAIQVG
201: TGVAPLIQCS EGPFDKFQLY QIFICVAEDA KTLIECPKPQ KFTCSDEILF HPFKKWMLKQ AASSVSFAEA FEMAGAAMGY

Best Arabidopsis Sequence Match ( AT1G14220.1 )
(BLAST)

001: MGAKGCVNVL LKLLVFQGLF VSRPQEDFDF FYFVLQWPGA YCDTSRACCY PTSGKPAADF GIHGLWPNYN GGSWPSNCDP DSQFDRSQIS DLVSSLKKNW
101: PTLSCPSNEG FNFWEHEWEK HGTCSESVMD QHEYFENALK LKQKANLLQI LKNSGINPDD GFYNLDKITN AIKDGIGFTP GIECNKDPER NAQLHQIYIC
201: VDTSGTEFIE CPVLPRGSCP SQIQFSKF

Arabidopsis Description

F7A19.32 protein [Source:UniProtKB/TrEMBL;Acc:Q9XI64]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.