Factsheet for HORVU6Hr1G081950.3

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 4
endoplasmic reticulum 3
vacuole 3
plasma membrane 3
golgi 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
TargetP:	secretory

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU2Hr1G091830.4
HORVU6Hr1G060760.3
HORVU7Hr1G000910.1
HORVU7Hr1G071270.2
HORVU7Hr1G088900.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G02990.1	HORVU7Hr1G000910.1	AT1G01010.1	21798944
AT2G02990.1	HORVU2Hr1G091830.4	AT3G60600.1	21798944
AT2G02990.1	HORVU6Hr1G060760.3	AT3G60600.1	21798944
AT2G02990.1	HORVU7Hr1G071270.2	AT3G60600.1	21798944
AT2G02990.1	HORVU7Hr1G088900.1	AT4G19030.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6B01G370600.1	Wheat	extracellular	73.4	65.35
TraesCS6A01G339600.1	Wheat	extracellular	72.91	64.91
TraesCS6D01G320200.1	Wheat	extracellular	72.41	64.47
HORVU0Hr1G017230.3	Barley	extracellular	71.92	63.76
EES15044	Sorghum	extracellular	59.11	53.33
Zm00001d032186_P001	Maize	extracellular	59.11	52.4
HORVU2Hr1G062880.3	Barley	plastid	66.01	50.95
Os08t0434100-01	Rice	extracellular	55.66	49.34
GSMUA_Achr5P23330_001	Banana	extracellular	49.26	44.05
GSMUA_Achr7P21030_001	Banana	extracellular	44.83	40.99
KRH70736	Soybean	extracellular	45.81	40.97
KRG89631	Soybean	endoplasmic reticulum, extracellular	45.81	40.97
CDY62181	Canola	extracellular	45.81	40.61
Bra026570.1-P	Field mustard	extracellular	45.81	40.61
CDY09344	Canola	extracellular	45.81	40.09
AT2G02990.1	Thale cress	extracellular	45.32	40.0
KRH74869	Soybean	endoplasmic reticulum, extracellular, plasma membrane	46.31	39.5
Bra024795.1-P	Field mustard	extracellular	43.35	38.43
CDY45186	Canola	extracellular	43.35	38.43
CDY03023	Canola	extracellular	43.35	38.43
HORVU6Hr1G017960.3	Barley	plastid	29.06	33.91
HORVU2Hr1G028430.1	Barley	extracellular	38.42	32.5
GSMUA_Achr4P00460_001	Banana	endoplasmic reticulum, extracellular, plastid	41.38	31.82
HORVU2Hr1G037400.1	Barley	extracellular	21.18	24.57
HORVU1Hr1G093560.1	Barley	extracellular	26.6	22.04
HORVU1Hr1G093780.1	Barley	vacuole	26.11	21.63
HORVU1Hr1G093660.11	Barley	extracellular	26.6	21.6
HORVU3Hr1G089580.5	Barley	cytosol, extracellular	30.54	20.2
HORVU3Hr1G089550.5	Barley	endoplasmic reticulum, extracellular, vacuole	27.59	19.79
HORVU1Hr1G093670.1	Barley	cytosol	20.69	19.0
HORVU1Hr1G093620.1	Barley	extracellular	20.69	16.67
HORVU1Hr1G093570.1	Barley	vacuole	20.69	15.0
HORVU6Hr1G081930.1	Barley	cytosol	3.94	10.53

Protein Annotations

Gene3D:3.90.730.10	MapMan:35.1	UniProt:A0A287UX81	ncoils:Coil	GO:GO:0003674	GO:GO:0003676
GO:GO:0003723	GO:GO:0003824	GO:GO:0004518	GO:GO:0005488	GO:GO:0006139	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016787	GO:GO:0033897	GO:GO:0090502	EnsemblPlantsGene:HORVU6Hr1G081950
EnsemblPlants:HORVU6Hr1G081950.3	InterPro:IPR036430	PFAM:PF00445	ScanProsite:PS00530	ScanProsite:PS00531	PFscan:PS51257
PANTHER:PTHR11240	PANTHER:PTHR11240:SF35	InterPro:RNase_T2-like	InterPro:RNase_T2-like_sf	InterPro:RNase_T2_His_AS_1	InterPro:RNase_T2_His_AS_2
InterPro:Ribonuclease_T2_eukaryotic	SUPFAM:SSF55895	SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI000B45F97C	SEG:seg

Description

No Description!

Coordinates

chrchr6H:+:546845128..546846472

Molecular Weight (calculated)

18966.6 Da

IEP (calculated)

5.120

GRAVY (calculated)

-0.033

Length

203 amino acids

Sequence
(BLAST)

001: MMRPCCLSLA LLVALSAVGC AAAQAADYDF FYLVLQWPGS YCDTKKSCCY PRTGKPAADF GIHGLWPNRD DGSYPQNCNP ANAFDPSKVS DLLSSLRAEW
101: PTLACPASDG LQFWAHEWEK HGTCAQNLFN EHGYFQTALH LRDQLRVLDA LAXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXQRDIID SIEITSMAMI
201: VMV

Best Arabidopsis Sequence Match ( AT1G14220.1 )
(BLAST)

001: MGAKGCVNVL LKLLVFQGLF VSRPQEDFDF FYFVLQWPGA YCDTSRACCY PTSGKPAADF GIHGLWPNYN GGSWPSNCDP DSQFDRSQIS DLVSSLKKNW
101: PTLSCPSNEG FNFWEHEWEK HGTCSESVMD QHEYFENALK LKQKANLLQI LKNSGINPDD GFYNLDKITN AIKDGIGFTP GIECNKDPER NAQLHQIYIC
201: VDTSGTEFIE CPVLPRGSCP SQIQFSKF

Arabidopsis Description

F7A19.32 protein [Source:UniProtKB/TrEMBL;Acc:Q9XI64]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.