Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 4
- endoplasmic reticulum 2
- vacuole 2
- plasma membrane 2
- golgi 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU1Hr1G093780.1 | Barley | vacuole | 94.4 | 96.33 |
| HORVU1Hr1G093670.1 | Barley | cytosol | 84.0 | 95.02 |
| HORVU1Hr1G093560.1 | Barley | extracellular | 92.8 | 94.69 |
| TraesCS1D01G149800.1 | Wheat | extracellular | 89.2 | 91.02 |
| TraesCS1B01G170200.1 | Wheat | extracellular | 88.0 | 89.8 |
| TraesCS1A01G152800.1 | Wheat | extracellular | 88.0 | 89.8 |
| Os09t0537700-02 | Rice | extracellular | 75.2 | 74.6 |
| EER99262 | Sorghum | extracellular | 66.4 | 66.67 |
| GSMUA_Achr4P08950_001 | Banana | extracellular | 42.4 | 43.98 |
| HORVU1Hr1G093620.1 | Barley | extracellular | 42.4 | 42.06 |
| HORVU1Hr1G093570.1 | Barley | vacuole | 42.4 | 37.86 |
| HORVU6Hr1G081930.1 | Barley | cytosol | 10.4 | 34.21 |
| HORVU0Hr1G017230.3 | Barley | extracellular | 29.6 | 32.31 |
| HORVU2Hr1G062880.3 | Barley | plastid | 31.6 | 30.04 |
| HORVU2Hr1G028430.1 | Barley | extracellular | 26.0 | 27.08 |
| HORVU6Hr1G081950.3 | Barley | extracellular | 21.6 | 26.6 |
| HORVU3Hr1G089550.5 | Barley | endoplasmic reticulum, extracellular, vacuole | 23.6 | 20.85 |
| HORVU3Hr1G089580.5 | Barley | cytosol, extracellular | 22.8 | 18.57 |
| HORVU2Hr1G037400.1 | Barley | extracellular | 12.8 | 18.29 |
| HORVU6Hr1G017960.3 | Barley | plastid | 12.4 | 17.82 |
Protein Annotations
| EnsemblPlants:HORVU1Hr1G093660.11 | EnsemblPlantsGene:HORVU1Hr1G093660 | Gene3D:3.90.730.10 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003723 |
| GO:GO:0003824 | GO:GO:0004518 | GO:GO:0005488 | GO:GO:0016787 | GO:GO:0033897 | InterPro:IPR036430 |
| InterPro:RNase_T2-like | InterPro:RNase_T2-like_sf | InterPro:Ribonuclease_T2_eukaryotic | PANTHER:PTHR11240 | PANTHER:PTHR11240:SF24 | PFAM:PF00445 |
| SEG:seg | SignalP:SignalP-noTM | SUPFAM:SSF55895 | TMHMM:TMhelix | MapMan:35.1 | : |
Description
No Description!
Coordinates
chrchr1H:+:553651123..553709366
Molecular Weight (calculated)
28136.6 Da
IEP (calculated)
6.635
GRAVY (calculated)
-0.200
Length
250 amino acids
Sequence
(BLAST)
(BLAST)
001: FSRGDMAMRA ISLCLVVGLL AAAAPASATS FDFYYLILKW PGAYCTDSDY GCCVPKYGYP AEDFFVESFM TFDLSLNKAI VRCNSDKPFD VNKLEPIENN
101: LNHYWSNIHC PCNDGTGTWK SEWRSYGVCS GLKEVDYFRA ALNLRKNADV LGALAEQGIN PDYRLYNTEH IKWAVNQKLG VMPGVQCRDG PFGKKQLYQI
201: YLCVDKDGKT FIDCPKLPKL QCPEEALFHP FHTWMLNATS SAKITLPTEA
101: LNHYWSNIHC PCNDGTGTWK SEWRSYGVCS GLKEVDYFRA ALNLRKNADV LGALAEQGIN PDYRLYNTEH IKWAVNQKLG VMPGVQCRDG PFGKKQLYQI
201: YLCVDKDGKT FIDCPKLPKL QCPEEALFHP FHTWMLNATS SAKITLPTEA
001: MGAKGCVNVL LKLLVFQGLF VSRPQEDFDF FYFVLQWPGA YCDTSRACCY PTSGKPAADF GIHGLWPNYN GGSWPSNCDP DSQFDRSQIS DLVSSLKKNW
101: PTLSCPSNEG FNFWEHEWEK HGTCSESVMD QHEYFENALK LKQKANLLQI LKNSGINPDD GFYNLDKITN AIKDGIGFTP GIECNKDPER NAQLHQIYIC
201: VDTSGTEFIE CPVLPRGSCP SQIQFSKF
101: PTLSCPSNEG FNFWEHEWEK HGTCSESVMD QHEYFENALK LKQKANLLQI LKNSGINPDD GFYNLDKITN AIKDGIGFTP GIECNKDPER NAQLHQIYIC
201: VDTSGTEFIE CPVLPRGSCP SQIQFSKF
Arabidopsis Description
F7A19.32 protein [Source:UniProtKB/TrEMBL;Acc:Q9XI64]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.