Factsheet for TraesCS1D01G149800.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 7
endoplasmic reticulum 4
vacuole 4
plasma membrane 4
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1B01G170200.1	Wheat	extracellular	97.96	97.96
TraesCS1A01G152800.1	Wheat	extracellular	97.14	97.14
HORVU1Hr1G093560.1	Barley	extracellular	93.47	93.47
HORVU1Hr1G093780.1	Barley	vacuole	91.84	91.84
HORVU1Hr1G093660.11	Barley	extracellular	91.02	89.2
Os09t0537700-02	Rice	extracellular	77.96	75.79
EER99262	Sorghum	extracellular	67.35	66.27
GSMUA_Achr4P08950_001	Banana	extracellular	43.67	44.4
TraesCS1D01G149700.1	Wheat	endoplasmic reticulum, extracellular	42.45	41.27
TraesCS6D01G320200.1	Wheat	extracellular	33.06	35.53
TraesCS2D01G260000.1	Wheat	extracellular	32.24	34.35
TraesCS2D01G163200.1	Wheat	extracellular	29.8	30.29
TraesCS2D01G163300.1	Wheat	extracellular	28.16	28.63
TraesCS2D01G163100.1	Wheat	extracellular	26.53	27.9
TraesCS3D01G392200.1	Wheat	endoplasmic reticulum, extracellular, vacuole	24.08	20.85
TraesCS3D01G392300.1	Wheat	extracellular	22.86	19.93

Protein Annotations

Gene3D:3.90.730.10	MapMan:35.1	GO:GO:0003674	GO:GO:0003676	GO:GO:0003723	GO:GO:0003824
GO:GO:0004518	GO:GO:0005488	GO:GO:0016787	GO:GO:0033897	InterPro:IPR036430	PFAM:PF00445
PANTHER:PTHR11240	PANTHER:PTHR11240:SF24	InterPro:RNase_T2-like	InterPro:RNase_T2-like_sf	InterPro:Ribonuclease_T2_eukaryotic	SUPFAM:SSF55895
SignalP:SignalP-noTM	TMHMM:TMhelix	EnsemblPlantsGene:TraesCS1D01G149800	EnsemblPlants:TraesCS1D01G149800.1	TIGR:cd01061	SEG:seg

Description

No Description!

Coordinates

chr1D:+:206307460..206310846

Molecular Weight (calculated)

27721.2 Da

IEP (calculated)

6.638

GRAVY (calculated)

-0.167

Length

245 amino acids

Sequence
(BLAST)

001: MAQRTISLCL ILGLLAAAAP ANATSFDFYY LVLMWPGAYC VDSEYGCCVP KYGYPAEDFF VQSFTTFDLS LNKAIVRCNS DKPFDINKLE PIENNLNHYW
101: SNIHCPRTDG TSTWKSEWRS YGVCSGLKEV DYFRAALNLR KNADVLGALA EQGINPDYRL YSTEHIKWAV NQKLGVMPGV QCRDGPFGKK QLYQIYLCVD
201: KNGEAFIDCP KLPKLQCPEE VLFHPFHTWM LNATSPAKIM LPTEA

Best Arabidopsis Sequence Match ( AT1G14220.1 )
(BLAST)

001: MGAKGCVNVL LKLLVFQGLF VSRPQEDFDF FYFVLQWPGA YCDTSRACCY PTSGKPAADF GIHGLWPNYN GGSWPSNCDP DSQFDRSQIS DLVSSLKKNW
101: PTLSCPSNEG FNFWEHEWEK HGTCSESVMD QHEYFENALK LKQKANLLQI LKNSGINPDD GFYNLDKITN AIKDGIGFTP GIECNKDPER NAQLHQIYIC
201: VDTSGTEFIE CPVLPRGSCP SQIQFSKF

Arabidopsis Description

F7A19.32 protein [Source:UniProtKB/TrEMBL;Acc:Q9XI64]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.