Factsheet for TraesCS3D01G392300.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 6
endoplasmic reticulum 5
vacuole 4
plasma membrane 4
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3B01G430300.1	Wheat	unclear	95.73	96.42
TraesCS3A01G398300.1	Wheat	endoplasmic reticulum, extracellular	88.61	95.4
HORVU3Hr1G089580.5	Barley	cytosol, extracellular	90.39	82.74
OQU88033	Sorghum	endoplasmic reticulum, extracellular, vacuole	70.82	72.1
HORVU6Hr1G017960.3	Barley	plastid	36.3	58.62
Os01t0897200-01	Rice	extracellular, vacuole	56.23	55.63
KRH47963	Soybean	nucleus	45.55	47.41
TraesCS3D01G392200.1	Wheat	endoplasmic reticulum, extracellular, vacuole	46.62	46.29
AT2G39780.1	Thale cress	extracellular	42.35	45.95
KRH06524	Soybean	extracellular	43.42	45.35
GSMUA_Achr7P23750_001	Banana	mitochondrion	48.4	45.33
CDY60490	Canola	extracellular, plasma membrane, vacuole	40.21	44.14
Bra032671.1-P	Field mustard	extracellular	40.93	43.4
CDY39709	Canola	extracellular	40.93	43.4
Solyc09g020110.2.1	Tomato	plastid	37.72	40.77
Solyc06g082890.2.1	Tomato	extracellular, plasma membrane	39.86	40.58
Zm00001d042512_P006	Maize	endoplasmic reticulum, extracellular, vacuole	50.89	40.06
PGSC0003DMT400071177	Potato	cytosol, nucleus, peroxisome	27.76	32.64
TraesCS6D01G320200.1	Wheat	extracellular	25.98	32.02
TraesCS2D01G260000.1	Wheat	extracellular	25.98	31.74
VIT_00s1339g00010.t01	Wine grape	cytosol	11.74	31.73
TraesCS2D01G163200.1	Wheat	extracellular	26.33	30.71
TraesCS2D01G163300.1	Wheat	extracellular	26.33	30.71
TraesCS2D01G163100.1	Wheat	extracellular	23.49	28.33
TraesCS1D01G149800.1	Wheat	extracellular	19.93	22.86
TraesCS1D01G149700.1	Wheat	endoplasmic reticulum, extracellular	18.15	20.24

Protein Annotations

Gene3D:3.90.730.10	MapMan:35.1	GO:GO:0003674	GO:GO:0003676	GO:GO:0003723	GO:GO:0003824
GO:GO:0004518	GO:GO:0005488	GO:GO:0016787	GO:GO:0033897	InterPro:IPR036430	PFAM:PF00445
ScanProsite:PS00530	ScanProsite:PS00531	PANTHER:PTHR11240	PANTHER:PTHR11240:SF37	InterPro:RNase_T2-like	InterPro:RNase_T2-like_sf
InterPro:RNase_T2_His_AS_1	InterPro:RNase_T2_His_AS_2	InterPro:Ribonuclease_T2_eukaryotic	SUPFAM:SSF55895	SignalP:SignalP-noTM	TMHMM:TMhelix
EnsemblPlantsGene:TraesCS3D01G392300	EnsemblPlants:TraesCS3D01G392300.1	TIGR:cd01061	SEG:seg	:	:

Description

No Description!

Coordinates

chr3D:+:507486450..507488984

Molecular Weight (calculated)

30907.8 Da

IEP (calculated)

6.751

GRAVY (calculated)

-0.072

Length

281 amino acids

Sequence
(BLAST)

001: MATATATTAC LLAVWSLVAA GLFGTGLARS SVAPAAVGKE QREFDYFALA LQWPGTICSS TRHCCAVNGC CRSEALHTFT IHGLWPDYDD GTWPSCCRHT
101: SFDMDKLTPL KPALDKYWPS LYCSSSSTCF SGRGAFWAHE WEKHGTCSAP VVHEELQYFT AAIDLYLKYN VTEMLATGDI LVSNGKEYAL SDVIDTIKHA
201: FGGSPQIICK KGSVEELRLC FTKDLKPRDC LTTSAMYKNL SKSKHCPKKI SLPTYDPIVL TNSTLEIVPE ASDNGLYFYT S

Best Arabidopsis Sequence Match ( AT2G39780.1 )
(BLAST)

001: MASRLCLLLL VACIAGAFAG DVIELNRSQR EFDYFALSLQ WPGTYCRGTR HCCSKNACCR GSDAPTQFTI HGLWPDYNDG SWPSCCYRSD FKEKEISTLM
101: DGLEKYWPSL SCGSPSSCNG GKGSFWGHEW EKHGTCSSPV FHDEYNYFLT TLNLYLKHNV TDVLYQAGYV ASNSEKYPLG GIVTAIQNAF HITPEVVCKR
201: DAIDEIRICF YKDFKPRDCV GSQDLTSRKS CPKYVSLPEY TPLDGEAMVL KMPTEREAL

Arabidopsis Description

RNS2Ribonuclease 2 [Source:UniProtKB/Swiss-Prot;Acc:P42814]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.