Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- extracellular 1
- mitochondrion 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc06g082890.2.1 | Tomato | extracellular, plasma membrane | 69.87 | 60.51 |
| VIT_00s1339g00010.t01 | Wine grape | cytosol | 25.52 | 58.65 |
| KRH47963 | Soybean | nucleus | 46.44 | 41.11 |
| KRH06524 | Soybean | extracellular | 46.03 | 40.89 |
| CDY60490 | Canola | extracellular, plasma membrane, vacuole | 41.84 | 39.06 |
| AT2G39780.1 | Thale cress | extracellular | 42.26 | 39.0 |
| Bra032671.1-P | Field mustard | extracellular | 41.0 | 36.98 |
| CDY39709 | Canola | extracellular | 41.0 | 36.98 |
| GSMUA_Achr7P23750_001 | Banana | mitochondrion | 38.91 | 31.0 |
| TraesCS3A01G398300.1 | Wheat | endoplasmic reticulum, extracellular | 32.22 | 29.5 |
| OQU88033 | Sorghum | endoplasmic reticulum, extracellular, vacuole | 33.05 | 28.62 |
| TraesCS3B01G430300.1 | Wheat | unclear | 32.64 | 27.96 |
| TraesCS3D01G392300.1 | Wheat | extracellular | 32.64 | 27.76 |
| Os01t0897200-01 | Rice | extracellular, vacuole | 32.64 | 27.46 |
| Os01t0897300-01 | Rice | extracellular | 30.54 | 26.26 |
| TraesCS3A01G398200.1 | Wheat | endoplasmic reticulum, extracellular, vacuole | 30.96 | 26.15 |
| TraesCS3D01G392200.1 | Wheat | endoplasmic reticulum, extracellular, vacuole | 30.96 | 26.15 |
| HORVU3Hr1G089550.5 | Barley | endoplasmic reticulum, extracellular, vacuole | 30.96 | 26.15 |
| TraesCS3B01G430200.1 | Wheat | endoplasmic reticulum, extracellular, mitochondrion | 30.54 | 25.8 |
| HORVU3Hr1G089580.5 | Barley | cytosol, extracellular | 31.8 | 24.76 |
| KXG33898 | Sorghum | extracellular, plasma membrane | 30.54 | 23.93 |
| HORVU6Hr1G017960.3 | Barley | plastid | 17.15 | 23.56 |
| PGSC0003DMT400007421 | Potato | cytosol | 19.67 | 21.56 |
| OQU81225 | Sorghum | cytosol | 10.88 | 21.14 |
| PGSC0003DMT400007343 | Potato | extracellular, mitochondrion, nucleus | 8.79 | 19.63 |
| Zm00001d042511_P005 | Maize | golgi, mitochondrion, plasma membrane | 25.1 | 17.0 |
| PGSC0003DMT400068755 | Potato | extracellular | 13.81 | 15.28 |
| Zm00001d042512_P006 | Maize | endoplasmic reticulum, extracellular, vacuole | 20.08 | 13.45 |
Protein Annotations
| Gene3D:3.90.730.10 | MapMan:35.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003723 | GO:GO:0003824 |
| GO:GO:0004518 | GO:GO:0004521 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005737 | GO:GO:0005773 | GO:GO:0005783 | GO:GO:0006139 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009056 | GO:GO:0009987 | GO:GO:0010168 | GO:GO:0010507 | GO:GO:0016075 | GO:GO:0016787 |
| GO:GO:0033897 | GO:GO:0090502 | InterPro:IPR036430 | UniProt:M1CNB4 | PFAM:PF00445 | EnsemblPlantsGene:PGSC0003DMG400027682 |
| PGSC:PGSC0003DMG400027682 | EnsemblPlants:PGSC0003DMT400071177 | PANTHER:PTHR11240 | PANTHER:PTHR11240:SF37 | InterPro:RNase_T2-like | InterPro:RNase_T2-like_sf |
| SUPFAM:SSF55895 | UniParc:UPI0002965F3A | : | : | : | : |
Description
RNase NGR2 [Source:PGSC_GENE;Acc:PGSC0003DMG400027682]
Coordinates
chr6:-:57892514..57899920
Molecular Weight (calculated)
26453.0 Da
IEP (calculated)
4.731
GRAVY (calculated)
-0.209
Length
239 amino acids
Sequence
(BLAST)
(BLAST)
001: MWKKDCYEGK PDTRESLITS SYLSYGLAQL AGIPPNAALP MPVADGLWAD YNDGTWPACC SGPQFDKEQS FVLDTSGLWS FYMPFSFHDT DLRSLPWIFA
101: GKWYHSSGLK KHGTCSYPVV HDEYEYFLMT LNVYFKYNVT GVLFEAGYVP SNSEKYPLGG IISAIQNAFH ATPELICSGD AVEELRICFY KDLQPRDCAS
201: GSIIKSGRVS SGSCPQYVSL PVNGSGGLDN TTADFLSER
101: GKWYHSSGLK KHGTCSYPVV HDEYEYFLMT LNVYFKYNVT GVLFEAGYVP SNSEKYPLGG IISAIQNAFH ATPELICSGD AVEELRICFY KDLQPRDCAS
201: GSIIKSGRVS SGSCPQYVSL PVNGSGGLDN TTADFLSER
001: MASRLCLLLL VACIAGAFAG DVIELNRSQR EFDYFALSLQ WPGTYCRGTR HCCSKNACCR GSDAPTQFTI HGLWPDYNDG SWPSCCYRSD FKEKEISTLM
101: DGLEKYWPSL SCGSPSSCNG GKGSFWGHEW EKHGTCSSPV FHDEYNYFLT TLNLYLKHNV TDVLYQAGYV ASNSEKYPLG GIVTAIQNAF HITPEVVCKR
201: DAIDEIRICF YKDFKPRDCV GSQDLTSRKS CPKYVSLPEY TPLDGEAMVL KMPTEREAL
101: DGLEKYWPSL SCGSPSSCNG GKGSFWGHEW EKHGTCSSPV FHDEYNYFLT TLNLYLKHNV TDVLYQAGYV ASNSEKYPLG GIVTAIQNAF HITPEVVCKR
201: DAIDEIRICF YKDFKPRDCV GSQDLTSRKS CPKYVSLPEY TPLDGEAMVL KMPTEREAL
Arabidopsis Description
RNS2Ribonuclease 2 [Source:UniProtKB/Swiss-Prot;Acc:P42814]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.