Factsheet for TraesCS3B01G430200.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, endoplasmic reticulum, extracellular

Predictor Summary:

extracellular 4
endoplasmic reticulum 4
vacuole 3
plasma membrane 3
golgi 3
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, extracellular, mitochondrion
Any Predictor:	mitochondrion, secretory
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
TargetP:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3A01G398200.1	Wheat	endoplasmic reticulum, extracellular, vacuole	94.35	94.35
HORVU3Hr1G089550.5	Barley	endoplasmic reticulum, extracellular, vacuole	91.52	91.52
TraesCS3D01G392200.1	Wheat	endoplasmic reticulum, extracellular, vacuole	89.05	89.05
Os01t0897300-01	Rice	extracellular	65.72	66.91
KXG33898	Sorghum	extracellular, plasma membrane	71.73	66.56
Zm00001d042511_P005	Maize	golgi, mitochondrion, plasma membrane	62.19	49.86
TraesCS3B01G430300.1	Wheat	unclear	46.29	46.95
CDY60490	Canola	extracellular, plasma membrane, vacuole	40.99	45.31
AT2G39780.1	Thale cress	extracellular	41.34	45.17
Bra032671.1-P	Field mustard	extracellular	40.28	43.02
CDY39709	Canola	extracellular	40.28	43.02
GSMUA_Achr7P23750_001	Banana	mitochondrion	45.58	43.0
KRH47963	Soybean	nucleus	39.93	41.85
Solyc09g020110.2.1	Tomato	plastid	37.46	40.77
KRH06524	Soybean	extracellular	38.16	40.15
Solyc06g082890.2.1	Tomato	extracellular, plasma membrane	37.46	38.41
VIT_00s1339g00010.t01	Wine grape	cytosol	12.37	33.65
TraesCS2B01G182900.1	Wheat	extracellular	26.5	31.25
PGSC0003DMT400071177	Potato	cytosol, nucleus, peroxisome	25.8	30.54
TraesCS2B01G278200.1	Wheat	extracellular	24.73	30.43
TraesCS6B01G370600.1	Wheat	extracellular	24.38	30.26
TraesCS1B01G170200.1	Wheat	extracellular	21.2	24.49
TraesCS1B01G170100.1	Wheat	endoplasmic reticulum, extracellular	19.08	21.09

Protein Annotations

Gene3D:3.90.730.10	MapMan:35.1	GO:GO:0003674	GO:GO:0003676	GO:GO:0003723	GO:GO:0003824
GO:GO:0004518	GO:GO:0005488	GO:GO:0016787	GO:GO:0033897	InterPro:IPR036430	PFAM:PF00445
ScanProsite:PS00530	PANTHER:PTHR11240	PANTHER:PTHR11240:SF37	InterPro:RNase_T2-like	InterPro:RNase_T2-like_sf	InterPro:RNase_T2_His_AS_1
InterPro:Ribonuclease_T2_eukaryotic	SUPFAM:SSF55895	SignalP:SignalP-noTM	TMHMM:TMhelix	EnsemblPlantsGene:TraesCS3B01G430200	EnsemblPlants:TraesCS3B01G430200.1
TIGR:cd01061	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr3B:+:669633017..669635463

Molecular Weight (calculated)

31971.0 Da

IEP (calculated)

8.881

GRAVY (calculated)

-0.451

Length

283 amino acids

Sequence
(BLAST)

001: MDGTRRGRRL LLSLCFLCLA VLPPGALLAS PAAGRKRRQG GFDHYVLALQ WPGTVCRQTN HCCSSNGCCR SNPLNWFTIH GLWPQYSYGG WPSCCRPTTT
101: FNMNKIAMLR PILEKYWPSL YCGDTSTCFG GRGPFWAHEW AAHGTCGYPE IQDEYDYFST ALYLYSKYNV TKALRKAHIY PRNGRKYAVA HIVDAIDHAF
201: GRLPHLVCKN GSVQEVRLCF HKDYQPRDCG SEDDEAWSSS TRSHCPRYVT LPSYKQSALG NATEARLRNR AENAPLAHGQ SYV

Best Arabidopsis Sequence Match ( AT2G39780.1 )
(BLAST)

001: MASRLCLLLL VACIAGAFAG DVIELNRSQR EFDYFALSLQ WPGTYCRGTR HCCSKNACCR GSDAPTQFTI HGLWPDYNDG SWPSCCYRSD FKEKEISTLM
101: DGLEKYWPSL SCGSPSSCNG GKGSFWGHEW EKHGTCSSPV FHDEYNYFLT TLNLYLKHNV TDVLYQAGYV ASNSEKYPLG GIVTAIQNAF HITPEVVCKR
201: DAIDEIRICF YKDFKPRDCV GSQDLTSRKS CPKYVSLPEY TPLDGEAMVL KMPTEREAL

Arabidopsis Description

RNS2Ribonuclease 2 [Source:UniProtKB/Swiss-Prot;Acc:P42814]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.