Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 7
- endoplasmic reticulum 4
- vacuole 4
- plasma membrane 4
- golgi 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2D01G163300.1 | Wheat | extracellular | 97.5 | 97.1 |
| TraesCS2A01G157400.1 | Wheat | extracellular | 97.08 | 96.68 |
| HORVU2Hr1G028430.1 | Barley | extracellular | 93.33 | 93.33 |
| Os07t0630400-01 | Rice | extracellular | 66.67 | 62.5 |
| EER97591 | Sorghum | extracellular | 63.75 | 60.96 |
| Zm00001d022228_P001 | Maize | extracellular | 62.5 | 57.92 |
| TraesCS6B01G370600.1 | Wheat | extracellular | 43.33 | 45.61 |
| TraesCS2B01G278200.1 | Wheat | extracellular | 42.08 | 43.91 |
| TraesCS3B01G430300.1 | Wheat | unclear | 32.08 | 27.6 |
| TraesCS1B01G170200.1 | Wheat | extracellular | 27.92 | 27.35 |
| TraesCS3B01G430200.1 | Wheat | endoplasmic reticulum, extracellular, mitochondrion | 31.25 | 26.5 |
| TraesCS1B01G170100.1 | Wheat | endoplasmic reticulum, extracellular | 26.67 | 25.0 |
Protein Annotations
| Gene3D:3.90.730.10 | MapMan:35.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003723 | GO:GO:0003824 |
| GO:GO:0004518 | GO:GO:0005488 | GO:GO:0016787 | GO:GO:0033897 | InterPro:IPR036430 | PFAM:PF00445 |
| ScanProsite:PS00530 | ScanProsite:PS00531 | PANTHER:PTHR11240 | PANTHER:PTHR11240:SF18 | InterPro:RNase_T2-like | InterPro:RNase_T2-like_sf |
| InterPro:RNase_T2_His_AS_1 | InterPro:RNase_T2_His_AS_2 | InterPro:Ribonuclease_T2_eukaryotic | SUPFAM:SSF55895 | SignalP:SignalP-noTM | EnsemblPlantsGene:TraesCS2B01G182900 |
| EnsemblPlants:TraesCS2B01G182900.1 | TIGR:cd01061 | SEG:seg | : | : | : |
Description
No Description!
Coordinates
chr2B:-:157734939..157736070
Molecular Weight (calculated)
26781.0 Da
IEP (calculated)
6.492
GRAVY (calculated)
-0.247
Length
240 amino acids
Sequence
(BLAST)
(BLAST)
001: MKLVVLSALL LLSLVAVSSA EEFDFFYLVQ QWPGSFCDTK KGCCFPDTGK PATDFGIHGL WPNYAKCKTR GELDGALEMV TKRKKKCWPE NCNSEPLKLW
101: EIKDLVTELD ANWPTLACKS GKSIEFWTHE WEKHGTCSNL DQHGYFKTAL GFKAHHNLTG ILADAGIVPS DSETYFLSSI RDAIKEGTGF TANLECNRGV
201: AGETQLFQVY QCIDRAGKNL IDCPLPMQGN CKDRVQLPAF
101: EIKDLVTELD ANWPTLACKS GKSIEFWTHE WEKHGTCSNL DQHGYFKTAL GFKAHHNLTG ILADAGIVPS DSETYFLSSI RDAIKEGTGF TANLECNRGV
201: AGETQLFQVY QCIDRAGKNL IDCPLPMQGN CKDRVQLPAF
001: MRGIIIVSLL ILQSLVVSSS QTEPDFNFFY WVNYWPGAIC DSQKGCCPPT KGNTASDFII HGLWPQFNNG TWPAFCDQTN LFDISKISDL VCQMEKKWTE
101: WGVWACPSNE TNLWEHEWNK HGTCVQSIFD QHSYFRTNLK FKHKVHLLNI LIQKGIKPND GFYSLDEIKN AIKCAIGFAP GIECNEDVKG NKQLFQIYIC
201: LDNYAKEFVE CPYVPDKSCA SKIKFPSLPE RDSLNESLSV MSSVSTT
101: WGVWACPSNE TNLWEHEWNK HGTCVQSIFD QHSYFRTNLK FKHKVHLLNI LIQKGIKPND GFYSLDEIKN AIKCAIGFAP GIECNEDVKG NKQLFQIYIC
201: LDNYAKEFVE CPYVPDKSCA SKIKFPSLPE RDSLNESLSV MSSVSTT
Arabidopsis Description
Ribonuclease T2 family protein [Source:UniProtKB/TrEMBL;Acc:F4HUG9]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.