Factsheet for Zm00001d022228_P001

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 7
endoplasmic reticulum 4
vacuole 4
plasma membrane 4
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

extracellular: 20408568

msms PMID: 20408568 doi

W Ma, N Muthreich, C Liao, M Franz-Wachtel, W Schütz, F Zhang, F Hochholdinger, C Li

Department of Plant Nutrition, China Agricultural University, Beijing, PR China.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER97591	Sorghum	extracellular	81.85	84.46
HORVU2Hr1G028430.1	Barley	extracellular	59.85	64.58
Os07t0630400-01	Rice	extracellular	63.32	64.06
TraesCS2D01G163300.1	Wheat	extracellular	58.69	63.07
TraesCS2A01G157400.1	Wheat	extracellular	58.3	62.66
TraesCS2B01G182900.1	Wheat	extracellular	57.92	62.5
TraesCS2D01G163200.1	Wheat	extracellular	55.21	59.34
Zm00001d032186_P001	Maize	extracellular	38.61	43.67
Zm00001d022630_P001	Maize	plastid	23.17	23.81
Zm00001d042511_P005	Maize	golgi, mitochondrion, plasma membrane	20.46	15.01
Zm00001d042512_P006	Maize	endoplasmic reticulum, extracellular, vacuole	16.99	12.32

Protein Annotations

Gene3D:3.90.730.10	MapMan:35.1	UniProt:A0A1D6IKH3	GO:GO:0003674	GO:GO:0003676	GO:GO:0003723
GO:GO:0003824	GO:GO:0004518	GO:GO:0005488	GO:GO:0006139	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016787	GO:GO:0033897	GO:GO:0090502	InterPro:IPR036430	ProteinID:ONM59902.1
PFAM:PF00445	ScanProsite:PS00530	ScanProsite:PS00531	PANTHER:PTHR11240	PANTHER:PTHR11240:SF18	InterPro:RNase_T2-like
InterPro:RNase_T2-like_sf	InterPro:RNase_T2_His_AS_1	InterPro:RNase_T2_His_AS_2	InterPro:Ribonuclease_T2_eukaryotic	SUPFAM:SSF55895	SignalP:SignalP-noTM
UniParc:UPI000221DAD6	EnsemblPlantsGene:Zm00001d022228	EnsemblPlants:Zm00001d022228_P001	EnsemblPlants:Zm00001d022228_T001	SEG:seg	:

Description

Ribonuclease 1

Coordinates

chr7:+:173192813..173193915

Molecular Weight (calculated)

28502.7 Da

IEP (calculated)

7.081

GRAVY (calculated)

-0.235

Length

259 amino acids

Sequence
(BLAST)

001: MMKLAIAFVV LLSSFLADSS TAEEFDFFYL VQQWPGSFCD TRQGCCFPDG AGKPAAAFGI HGLWPNYAKC RGRHHREGGG LARAVLGAGD AFLAAVGRRG
101: KCWPEYCGGG GGGHQLSPWD IRDLVASLGR SWPTLSCKNR RSFEFWSYEW KKHGTCSNLD PHDYFARALQ LRARHDLAAV LADAGIVPSD TDTYPVDRVR
201: DAIAQGTGFA ANLECNRDAD GEAQLFQVYQ CVDREAKDLI DCPLPMPTKC TDRVKLPVF

Best Arabidopsis Sequence Match ( AT2G02990.1 )
(BLAST)

001: MKILLASLCL ISLLVILPSV FSASSSSEDF DFFYFVQQWP GSYCDTQKKC CYPNSGKPAA DFGIHGLWPN YKDGTYPSNC DASKPFDSST ISDLLTSMKK
101: SWPTLACPSG SGEAFWEHEW EKHGTCSESV IDQHEYFQTA LNLKQKTNLL GALTKAGINP DGKSYSLESI RDSIKESIGF TPWVECNRDG SGNSQLYQVY
201: LCVDRSGSGL IECPVFPHGK CGAEIEFPSF

Arabidopsis Description

RNS1Ribonuclease 1 [Source:UniProtKB/Swiss-Prot;Acc:P42813]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.