Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 9
- endoplasmic reticulum 5
- vacuole 5
- plasma membrane 5
- golgi 5
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d022228_P001 | Maize | extracellular | 84.46 | 81.85 |
| HORVU2Hr1G028430.1 | Barley | extracellular | 62.95 | 65.83 |
| Os07t0630400-01 | Rice | extracellular | 66.53 | 65.23 |
| TraesCS2D01G163300.1 | Wheat | extracellular | 61.35 | 63.9 |
| TraesCS2B01G182900.1 | Wheat | extracellular | 60.96 | 63.75 |
| TraesCS2A01G157400.1 | Wheat | extracellular | 60.96 | 63.49 |
| TraesCS2D01G163200.1 | Wheat | extracellular | 57.77 | 60.17 |
| EES15044 | Sorghum | extracellular | 38.25 | 42.67 |
| OQU90314 | Sorghum | extracellular | 34.26 | 38.22 |
| EER99262 | Sorghum | extracellular | 27.49 | 27.71 |
| OQU88033 | Sorghum | endoplasmic reticulum, extracellular, vacuole | 26.69 | 24.28 |
| EER99263 | Sorghum | extracellular | 23.11 | 22.48 |
| KXG33898 | Sorghum | extracellular, plasma membrane | 25.9 | 21.31 |
| OQU81225 | Sorghum | cytosol | 7.17 | 14.63 |
Protein Annotations
| Gene3D:3.90.730.10 | MapMan:35.1 | EntrezGene:8063515 | UniProt:C5X369 | EnsemblPlants:EER97591 | ProteinID:EER97591 |
| ProteinID:EER97591.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003723 | GO:GO:0003824 | GO:GO:0004518 |
| GO:GO:0005488 | GO:GO:0006139 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016787 |
| GO:GO:0033897 | GO:GO:0090502 | InterPro:IPR036430 | PFAM:PF00445 | ScanProsite:PS00531 | PANTHER:PTHR11240 |
| PANTHER:PTHR11240:SF18 | InterPro:RNase_T2-like | InterPro:RNase_T2-like_sf | InterPro:RNase_T2_His_AS_2 | InterPro:Ribonuclease_T2_eukaryotic | EnsemblPlantsGene:SORBI_3002G385500 |
| SUPFAM:SSF55895 | SignalP:SignalP-noTM | UniParc:UPI0001A839B4 | RefSeq:XP_002461070.1 | SEG:seg | : |
Description
hypothetical protein
Coordinates
chr2:+:74033450..74034777
Molecular Weight (calculated)
27967.2 Da
IEP (calculated)
6.487
GRAVY (calculated)
-0.204
Length
251 amino acids
Sequence
(BLAST)
(BLAST)
001: MKLVIAFLVV FSLAVSSTAE KFDFFYLVQQ WPGSFCDTRQ GCCFPDDTKP AAAFGIHGMW PNYAKCRGRQ GLARAMLGDA AGADDAFLST VGRRGKCWPE
101: YCDDGNELSP WEIRDLVASL DRSWPTLSCK NRRSFQFWSY EWKKHGTCSN LEPHDYFARA LALKAKHDLA AILADAGIVP SDTETYTVSS VRDAIAQGTG
201: FVANLECNRD ADGEAQLFQV YQCVDRDAKK LIDCPLAMPT KCTDRVKLPV F
101: YCDDGNELSP WEIRDLVASL DRSWPTLSCK NRRSFQFWSY EWKKHGTCSN LEPHDYFARA LALKAKHDLA AILADAGIVP SDTETYTVSS VRDAIAQGTG
201: FVANLECNRD ADGEAQLFQV YQCVDRDAKK LIDCPLAMPT KCTDRVKLPV F
001: MKILLASLCL ISLLVILPSV FSASSSSEDF DFFYFVQQWP GSYCDTQKKC CYPNSGKPAA DFGIHGLWPN YKDGTYPSNC DASKPFDSST ISDLLTSMKK
101: SWPTLACPSG SGEAFWEHEW EKHGTCSESV IDQHEYFQTA LNLKQKTNLL GALTKAGINP DGKSYSLESI RDSIKESIGF TPWVECNRDG SGNSQLYQVY
201: LCVDRSGSGL IECPVFPHGK CGAEIEFPSF
101: SWPTLACPSG SGEAFWEHEW EKHGTCSESV IDQHEYFQTA LNLKQKTNLL GALTKAGINP DGKSYSLESI RDSIKESIGF TPWVECNRDG SGNSQLYQVY
201: LCVDRSGSGL IECPVFPHGK CGAEIEFPSF
Arabidopsis Description
RNS1Ribonuclease 1 [Source:UniProtKB/Swiss-Prot;Acc:P42813]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.