CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, extracellular

Predictor Summary:

plastid 1
mitochondrion 2
plasma membrane 4
extracellular 4
endoplasmic reticulum 3
vacuole 3
golgi 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, plasma membrane
Any Predictor:	mitochondrion, plastid, secretory
BaCelLo:	plastid
iPSORT:	mitochondrion
MultiLoc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	mitochondrion
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3A01G398200.1	Wheat	endoplasmic reticulum, extracellular, vacuole	67.21	72.44
TraesCS3D01G392200.1	Wheat	endoplasmic reticulum, extracellular, vacuole	66.89	72.08
TraesCS3B01G430200.1	Wheat	endoplasmic reticulum, extracellular, mitochondrion	66.56	71.73
HORVU3Hr1G089550.5	Barley	endoplasmic reticulum, extracellular, vacuole	65.9	71.02
Os01t0897300-01	Rice	extracellular	64.59	70.86
Zm00001d042511_P005	Maize	golgi, mitochondrion, plasma membrane	75.74	65.44
OQU88033	Sorghum	endoplasmic reticulum, extracellular, vacuole	44.26	48.91
AT2G39780.1	Thale cress	extracellular	39.67	46.72
CDY60490	Canola	extracellular, plasma membrane, vacuole	38.69	46.09
GSMUA_Achr7P23750_001	Banana	mitochondrion	44.92	45.67
KRH47963	Soybean	nucleus	40.33	45.56
KRH06524	Soybean	extracellular	39.67	44.98
Bra032671.1-P	Field mustard	extracellular	38.69	44.53
CDY39709	Canola	extracellular	38.69	44.53
Solyc09g020110.2.1	Tomato	plastid	37.05	43.46
Solyc06g082890.2.1	Tomato	extracellular, plasma membrane	35.08	38.77
VIT_00s1339g00010.t01	Wine grape	cytosol	12.46	36.54
OQU81225	Sorghum	cytosol	14.43	35.77
EES15044	Sorghum	extracellular	23.93	32.44
PGSC0003DMT400071177	Potato	cytosol, nucleus, peroxisome	23.93	30.54
EER97591	Sorghum	extracellular	21.31	25.9
EER99263	Sorghum	extracellular	20.98	24.81
EER99262	Sorghum	extracellular	18.03	22.09
OQU90314	Sorghum	extracellular	14.75	20.0

Protein Annotations

Gene3D:3.90.730.10	MapMan:35.1	UniProt:A0A1B6Q7K4	GO:GO:0003674	GO:GO:0003676	GO:GO:0003723
GO:GO:0003824	GO:GO:0004518	GO:GO:0005488	GO:GO:0006139	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016787	GO:GO:0033897	GO:GO:0090502	InterPro:IPR036430	EnsemblPlants:KXG33898
ProteinID:KXG33898	ProteinID:KXG33898.1	PFAM:PF00445	ScanProsite:PS00530	ScanProsite:PS00531	PANTHER:PTHR11240
PANTHER:PTHR11240:SF37	InterPro:RNase_T2-like	InterPro:RNase_T2-like_sf	InterPro:RNase_T2_His_AS_1	InterPro:RNase_T2_His_AS_2	InterPro:Ribonuclease_T2_eukaryotic
EnsemblPlantsGene:SORBI_3003G388300	SUPFAM:SSF55895	SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI00081AE1A2	SEG:seg

Description

hypothetical protein

Coordinates

chr3:-:69964456..69967455

Molecular Weight (calculated)

34205.2 Da

IEP (calculated)

9.486

GRAVY (calculated)

-0.292

Length

305 amino acids

Sequence
(BLAST)

001: METRRPRRGG KKRFLLPLAL LCLAVLLPGA LLPPSASASS SSPAVGGGSR KRRWVGFDYY VLALQWPGTI CRETSNCCDT NGCCRSKPLK WFTIHGLWPQ
101: YNYGGWPSCC RPTKFNINKI LMLMPILEKY WPSLYCGSSS TCFGGRGPFW VHEWETHGTC AYPEIQDEYD YFSTALYLYS KYNVTKALRK AHIRPASGRK
201: YAVGHIVAVI EYAFGAMPSL VCKNGSVQEL RLCFHKDYQP RDCTLETGTA PNSRSYCPRY VTFPSYKPSV MANTTEGISN QASKPMVSYT STSASEQRLG
301: LQVLK

Best Arabidopsis Sequence Match ( AT2G39780.1 )
(BLAST)

001: MASRLCLLLL VACIAGAFAG DVIELNRSQR EFDYFALSLQ WPGTYCRGTR HCCSKNACCR GSDAPTQFTI HGLWPDYNDG SWPSCCYRSD FKEKEISTLM
101: DGLEKYWPSL SCGSPSSCNG GKGSFWGHEW EKHGTCSSPV FHDEYNYFLT TLNLYLKHNV TDVLYQAGYV ASNSEKYPLG GIVTAIQNAF HITPEVVCKR
201: DAIDEIRICF YKDFKPRDCV GSQDLTSRKS CPKYVSLPEY TPLDGEAMVL KMPTEREAL

Arabidopsis Description

RNS2Ribonuclease 2 [Source:UniProtKB/Swiss-Prot;Acc:P42814]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.