Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 9
- endoplasmic reticulum 5
- vacuole 5
- plasma membrane 5
- golgi 5
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY39709 | Canola | extracellular | 100.0 | 100.0 |
| AT2G39780.1 | Thale cress | extracellular | 86.42 | 88.42 |
| KRH06524 | Soybean | extracellular | 58.49 | 57.62 |
| KRH47963 | Soybean | nucleus | 57.74 | 56.67 |
| Solyc09g020110.2.1 | Tomato | plastid | 55.47 | 56.54 |
| Solyc06g082890.2.1 | Tomato | extracellular, plasma membrane | 53.21 | 51.09 |
| VIT_00s1339g00010.t01 | Wine grape | cytosol | 19.25 | 49.04 |
| GSMUA_Achr7P23750_001 | Banana | mitochondrion | 52.45 | 46.33 |
| TraesCS3A01G398300.1 | Wheat | endoplasmic reticulum, extracellular | 43.02 | 43.68 |
| OQU88033 | Sorghum | endoplasmic reticulum, extracellular, vacuole | 44.53 | 42.75 |
| Os01t0897300-01 | Rice | extracellular | 44.15 | 42.09 |
| TraesCS3B01G430300.1 | Wheat | unclear | 43.77 | 41.58 |
| PGSC0003DMT400071177 | Potato | cytosol, nucleus, peroxisome | 36.98 | 41.0 |
| TraesCS3D01G392300.1 | Wheat | extracellular | 43.4 | 40.93 |
| TraesCS3B01G430200.1 | Wheat | endoplasmic reticulum, extracellular, mitochondrion | 43.02 | 40.28 |
| TraesCS3D01G392200.1 | Wheat | endoplasmic reticulum, extracellular, vacuole | 43.02 | 40.28 |
| TraesCS3A01G398200.1 | Wheat | endoplasmic reticulum, extracellular, vacuole | 42.64 | 39.93 |
| HORVU3Hr1G089550.5 | Barley | endoplasmic reticulum, extracellular, vacuole | 41.89 | 39.22 |
| KXG33898 | Sorghum | extracellular, plasma membrane | 44.53 | 38.69 |
| HORVU3Hr1G089580.5 | Barley | cytosol, extracellular | 43.77 | 37.78 |
| HORVU6Hr1G017960.3 | Barley | plastid | 24.15 | 36.78 |
| Bra026846.1-P | Field mustard | extracellular | 31.32 | 36.56 |
| Bra024795.1-P | Field mustard | extracellular | 29.06 | 33.62 |
| Bra012439.1-P | Field mustard | extracellular | 27.17 | 32.43 |
| Bra026570.1-P | Field mustard | extracellular | 27.92 | 32.31 |
| Os01t0897200-01 | Rice | extracellular, vacuole | 34.34 | 32.04 |
| Zm00001d042511_P005 | Maize | golgi, mitochondrion, plasma membrane | 37.36 | 28.05 |
| Bra026847.1-P | Field mustard | extracellular | 24.53 | 26.64 |
| OQU81225 | Sorghum | cytosol | 11.32 | 24.39 |
| Zm00001d042512_P006 | Maize | endoplasmic reticulum, extracellular, vacuole | 29.43 | 21.85 |
Protein Annotations
| Gene3D:3.90.730.10 | MapMan:35.1 | EnsemblPlantsGene:Bra032671 | EnsemblPlants:Bra032671.1 | EnsemblPlants:Bra032671.1-P | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003723 | GO:GO:0003824 | GO:GO:0004518 | GO:GO:0004521 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005773 | GO:GO:0005783 |
| GO:GO:0006139 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009056 | GO:GO:0009987 | GO:GO:0010168 |
| GO:GO:0010507 | GO:GO:0016075 | GO:GO:0016787 | GO:GO:0033897 | GO:GO:0090502 | InterPro:IPR036430 |
| UniProt:M4EV38 | PFAM:PF00445 | ScanProsite:PS00530 | PANTHER:PTHR11240 | PANTHER:PTHR11240:SF37 | InterPro:RNase_T2-like |
| InterPro:RNase_T2-like_sf | InterPro:RNase_T2_His_AS_1 | InterPro:Ribonuclease_T2_eukaryotic | SUPFAM:SSF55895 | SignalP:SignalP-noTM | TMHMM:TMhelix |
| UniParc:UPI000254400E | SEG:seg | : | : | : | : |
Description
AT2G39780 (E=7e-137) RNS2 | RNS2 (RIBONUCLEASE 2); RNA binding / endoribonuclease/ ribonuclease T2
Coordinates
chrA04:+:5738041..5740463
Molecular Weight (calculated)
29687.2 Da
IEP (calculated)
6.594
GRAVY (calculated)
-0.314
Length
265 amino acids
Sequence
(BLAST)
(BLAST)
001: MACRRSLLLL LLATVLSVSA YLPETGTLAG DDVVVLNRSQ REFDYFALSL QWPGTYCRGT RHCCSKNACC RGSDTPTQFT IHGLWPDYND GSWPSCCYRS
101: DFNEKEISTL MDGMDKYWPS LSCGSPSSCH GGKGSFWGHE KHGTCSSPVI RDEYSYFITT LNLYLKHNVT DVLYQAGYVA SNSEKYPLGG IVTAIQNAFH
201: ITPEVVCKRD AIDEIRICFY KDFKPRDCVG SKDMTSKKSC PKYVSLPEYT PLDGEAMVLK MPTDE
101: DFNEKEISTL MDGMDKYWPS LSCGSPSSCH GGKGSFWGHE KHGTCSSPVI RDEYSYFITT LNLYLKHNVT DVLYQAGYVA SNSEKYPLGG IVTAIQNAFH
201: ITPEVVCKRD AIDEIRICFY KDFKPRDCVG SKDMTSKKSC PKYVSLPEYT PLDGEAMVLK MPTDE
001: MASRLCLLLL VACIAGAFAG DVIELNRSQR EFDYFALSLQ WPGTYCRGTR HCCSKNACCR GSDAPTQFTI HGLWPDYNDG SWPSCCYRSD FKEKEISTLM
101: DGLEKYWPSL SCGSPSSCNG GKGSFWGHEW EKHGTCSSPV FHDEYNYFLT TLNLYLKHNV TDVLYQAGYV ASNSEKYPLG GIVTAIQNAF HITPEVVCKR
201: DAIDEIRICF YKDFKPRDCV GSQDLTSRKS CPKYVSLPEY TPLDGEAMVL KMPTEREAL
101: DGLEKYWPSL SCGSPSSCNG GKGSFWGHEW EKHGTCSSPV FHDEYNYFLT TLNLYLKHNV TDVLYQAGYV ASNSEKYPLG GIVTAIQNAF HITPEVVCKR
201: DAIDEIRICF YKDFKPRDCV GSQDLTSRKS CPKYVSLPEY TPLDGEAMVL KMPTEREAL
Arabidopsis Description
RNS2Ribonuclease 2 [Source:UniProtKB/Swiss-Prot;Acc:P42814]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.