Factsheet for Bra026847.1-P

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 7
endoplasmic reticulum 4
vacuole 6
plasma membrane 4
golgi 4
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	plastid, secretory
BaCelLo:	secretory
EpiLoc:	vacuole
iPSORT:	plastid
MultiLoc:	extracellular
Plant-mPloc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY33763	Canola	extracellular	98.77	98.77
AT1G14210.1	Thale cress	extracellular	85.66	84.62
VIT_01s0010g01250.t01	Wine grape	cytosol, nucleus, plastid	26.23	48.12
Bra012439.1-P	Field mustard	extracellular	43.44	47.75
GSMUA_Achr7P21030_001	Banana	extracellular	43.03	47.3
Bra026570.1-P	Field mustard	extracellular	44.26	47.16
GSMUA_Achr5P23330_001	Banana	extracellular	43.44	46.7
VIT_01s0026g02520.t01	Wine grape	extracellular	42.62	46.02
Bra024795.1-P	Field mustard	extracellular	43.03	45.85
Bra026846.1-P	Field mustard	extracellular	42.62	45.81
PGSC0003DMT400007421	Potato	cytosol	40.16	44.95
VIT_01s0010g00450.t01	Wine grape	extracellular	17.21	44.68
KRG89632	Soybean	extracellular	42.62	43.7
Solyc04g005640.2.1	Tomato	extracellular	40.57	41.25
Solyc05g013210.2.1	Tomato	cytosol	20.9	41.13
GSMUA_Achr4P00460_001	Banana	endoplasmic reticulum, extracellular, plastid	42.62	39.39
PGSC0003DMT400007343	Potato	extracellular, mitochondrion, nucleus	14.75	33.64
Bra032671.1-P	Field mustard	extracellular	26.64	24.53

Protein Annotations

Gene3D:3.90.730.10	MapMan:35.1	EnsemblPlantsGene:Bra026847	EnsemblPlants:Bra026847.1	EnsemblPlants:Bra026847.1-P	GO:GO:0003674
GO:GO:0003676	GO:GO:0003723	GO:GO:0003824	GO:GO:0004518	GO:GO:0005488	GO:GO:0006139
GO:GO:0006950	GO:GO:0008150	GO:GO:0008152	GO:GO:0009628	GO:GO:0009651	GO:GO:0009987
GO:GO:0016787	GO:GO:0033897	GO:GO:0090502	InterPro:IPR036430	UniProt:M4EDI7	PFAM:PF00445
ScanProsite:PS00530	ScanProsite:PS00531	PANTHER:PTHR11240	PANTHER:PTHR11240:SF19	InterPro:RNase_T2-like	InterPro:RNase_T2-like_sf
InterPro:RNase_T2_His_AS_1	InterPro:RNase_T2_His_AS_2	InterPro:Ribonuclease_T2_eukaryotic	SUPFAM:SSF55895	SignalP:SignalP-noTM	UniParc:UPI0002542E0D
SEG:seg	:	:	:	:	:

Description

AT1G14210 (E=1e-117) | ribonuclease T2 family protein

Coordinates

chrA09:+:33976293..33977261

Molecular Weight (calculated)

27750.3 Da

IEP (calculated)

7.837

GRAVY (calculated)

-0.252

Length

244 amino acids

Sequence
(BLAST)

001: MRGIIIASFF ILQSLLVSSS PSPPDFNFFY WVTYWPGAIC DSQKGCCPPP KGNTASDFMI HGLWPQFNNG TWPAFCDQTN LFDISKVSDL VNKMEKKWTE
101: WGVWACPSNE TKLWEHEWNK HGTCVQSVFD QHSYFLTNLR FRQKLNLLNI LKQKGIKPDG GLYGLDEIKN AIKCAIGYAP GIECNEDVKG TKQLFQIYIC
201: LDNYAKEFVE CPYVPDKSCA SKIKFPKFPK KDSLGETLSV ISSV

Best Arabidopsis Sequence Match ( AT1G14210.1 )
(BLAST)

001: MRGIIIVSLL ILQSLVVSSS QTEPDFNFFY WVNYWPGAIC DSQKGCCPPT KGNTASDFII HGLWPQFNNG TWPAFCDQTN LFDISKISDL VCQMEKKWTE
101: WGVWACPSNE TNLWEHEWNK HGTCVQSIFD QHSYFRTNLK FKHKVHLLNI LIQKGIKPND GFYSLDEIKN AIKCAIGFAP GIECNEDVKG NKQLFQIYIC
201: LDNYAKEFVE CPYVPDKSCA SKIKFPSLPE RDSLNESLSV MSSVSTT

Arabidopsis Description

Ribonuclease T2 family protein [Source:UniProtKB/TrEMBL;Acc:F4HUG9]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.