Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- vacuole 1
- plastid 1
- cytosol 2
- extracellular 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc04g005640.2.1 | Tomato | extracellular | 60.48 | 31.25 |
| PGSC0003DMT400007421 | Potato | cytosol | 54.84 | 31.19 |
| GSMUA_Achr7P21030_001 | Banana | extracellular | 51.61 | 28.83 |
| Solyc05g007950.2.1 | Tomato | extracellular | 53.23 | 28.7 |
| GSMUA_Achr5P23330_001 | Banana | extracellular | 51.61 | 28.19 |
| Solyc05g007940.2.1 | Tomato | extracellular | 50.0 | 26.16 |
| GSMUA_Achr4P00460_001 | Banana | endoplasmic reticulum, extracellular, plastid | 50.81 | 23.86 |
| KRG89632 | Soybean | extracellular | 43.55 | 22.69 |
| AT1G14210.1 | Thale cress | extracellular | 42.74 | 21.46 |
| Bra026847.1-P | Field mustard | extracellular | 41.13 | 20.9 |
| CDY33763 | Canola | extracellular | 41.13 | 20.9 |
| CDX81620 | Canola | extracellular | 34.68 | 19.72 |
| Solyc09g020110.2.1 | Tomato | plastid | 31.45 | 15.0 |
| Solyc06g082890.2.1 | Tomato | extracellular, plasma membrane | 29.84 | 13.41 |
| Solyc01g055200.1.1 | Tomato | extracellular | 22.58 | 12.67 |
Protein Annotations
| Gene3D:3.90.730.10 | MapMan:35.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003723 | GO:GO:0003824 |
| GO:GO:0004518 | GO:GO:0005488 | GO:GO:0006139 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 |
| GO:GO:0016787 | GO:GO:0033897 | GO:GO:0090502 | InterPro:IPR036430 | UniProt:K4BY42 | PFAM:PF00445 |
| PANTHER:PTHR11240 | PANTHER:PTHR11240:SF35 | InterPro:RNase_T2-like | InterPro:RNase_T2-like_sf | SUPFAM:SSF55895 | EnsemblPlantsGene:Solyc05g013210.2 |
| EnsemblPlants:Solyc05g013210.2.1 | UniParc:UPI0002765CC2 | : | : | : | : |
Description
No Description!
Coordinates
chr5:+:6275063..6277709
Molecular Weight (calculated)
14223.8 Da
IEP (calculated)
7.875
GRAVY (calculated)
-0.675
Length
124 amino acids
Sequence
(BLAST)
(BLAST)
001: MKSKPKWPPA LCDQKLSCYS TTGKPTLDFG VHGLRPNYDN GSYPSSCDIT NLYDETKIKD LISSMQENWP TLACLRNKGT KFWSHEWDKH VTCSLSTLDE
101: HSYFKAALTI KEKELSQEAF IAWK
101: HSYFKAALTI KEKELSQEAF IAWK
001: MGAKGCVNVL LKLLVFQGLF VSRPQEDFDF FYFVLQWPGA YCDTSRACCY PTSGKPAADF GIHGLWPNYN GGSWPSNCDP DSQFDRSQIS DLVSSLKKNW
101: PTLSCPSNEG FNFWEHEWEK HGTCSESVMD QHEYFENALK LKQKANLLQI LKNSGINPDD GFYNLDKITN AIKDGIGFTP GIECNKDPER NAQLHQIYIC
201: VDTSGTEFIE CPVLPRGSCP SQIQFSKF
101: PTLSCPSNEG FNFWEHEWEK HGTCSESVMD QHEYFENALK LKQKANLLQI LKNSGINPDD GFYNLDKITN AIKDGIGFTP GIECNKDPER NAQLHQIYIC
201: VDTSGTEFIE CPVLPRGSCP SQIQFSKF
Arabidopsis Description
F7A19.32 protein [Source:UniProtKB/TrEMBL;Acc:Q9XI64]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.