Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 7
- endoplasmic reticulum 5
- vacuole 6
- plasma membrane 5
- golgi 5
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra026847.1-P | Field mustard | extracellular | 98.77 | 98.77 |
| CDX81620 | Canola | extracellular | 81.97 | 91.74 |
| AT1G14210.1 | Thale cress | extracellular | 86.89 | 85.83 |
| CDY20583 | Canola | extracellular | 43.85 | 48.2 |
| CDY40267 | Canola | extracellular | 43.85 | 48.2 |
| VIT_01s0010g01250.t01 | Wine grape | cytosol, nucleus, plastid | 26.23 | 48.12 |
| GSMUA_Achr7P21030_001 | Banana | extracellular | 43.44 | 47.75 |
| CDY62181 | Canola | extracellular | 44.67 | 47.6 |
| GSMUA_Achr5P23330_001 | Banana | extracellular | 43.85 | 47.14 |
| CDY09344 | Canola | extracellular | 44.67 | 46.98 |
| CDX96863 | Canola | extracellular | 43.85 | 46.93 |
| VIT_01s0026g02520.t01 | Wine grape | extracellular | 43.03 | 46.46 |
| CDY45186 | Canola | extracellular | 43.44 | 46.29 |
| CDY03023 | Canola | extracellular | 43.44 | 46.29 |
| CDY33761 | Canola | extracellular | 43.03 | 46.26 |
| CDX84041 | Canola | extracellular | 43.03 | 46.05 |
| VIT_01s0010g00450.t01 | Wine grape | extracellular | 17.62 | 45.74 |
| PGSC0003DMT400007421 | Potato | cytosol | 40.16 | 44.95 |
| KRG89632 | Soybean | extracellular | 43.03 | 44.12 |
| CDY33762 | Canola | peroxisome | 38.11 | 42.86 |
| Solyc04g005640.2.1 | Tomato | extracellular | 40.57 | 41.25 |
| Solyc05g013210.2.1 | Tomato | cytosol | 20.9 | 41.13 |
| GSMUA_Achr4P00460_001 | Banana | endoplasmic reticulum, extracellular, plastid | 42.21 | 39.02 |
| PGSC0003DMT400007343 | Potato | extracellular, mitochondrion, nucleus | 14.75 | 33.64 |
| CDY60490 | Canola | extracellular, plasma membrane, vacuole | 27.05 | 25.78 |
| CDY39709 | Canola | extracellular | 26.64 | 24.53 |
| CDX81621 | Canola | extracellular, nucleus, peroxisome | 40.16 | 15.31 |
Protein Annotations
| Gene3D:3.90.730.10 | MapMan:35.1 | GO:A0A078HA79 | UniProt:A0A078HA79 | EnsemblPlants:CDY33763 | ProteinID:CDY33763 |
| ProteinID:CDY33763.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003723 | GO:GO:0003824 | GO:GO:0004518 |
| GO:GO:0005488 | GO:GO:0006139 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016787 |
| GO:GO:0033897 | GO:GO:0090502 | EnsemblPlantsGene:GSBRNA2T00055179001 | InterPro:IPR036430 | PFAM:PF00445 | ScanProsite:PS00530 |
| ScanProsite:PS00531 | PANTHER:PTHR11240 | PANTHER:PTHR11240:SF19 | InterPro:RNase_T2-like | InterPro:RNase_T2-like_sf | InterPro:RNase_T2_His_AS_1 |
| InterPro:RNase_T2_His_AS_2 | InterPro:Ribonuclease_T2_eukaryotic | SUPFAM:SSF55895 | SignalP:SignalP-noTM | UniParc:UPI0004EF29BC | SEG:seg |
Description
BnaA09g45690DBnaA09g45690D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HA79]
Coordinates
chrLK032321:+:248166..249196
Molecular Weight (calculated)
27730.3 Da
IEP (calculated)
7.837
GRAVY (calculated)
-0.237
Length
244 amino acids
Sequence
(BLAST)
(BLAST)
001: MRGIIIVSFL ILQSLVVSSS PSPPDFNFFY WVTYWPGAIC DSQKGCCPPP KGNTASDFMI HGLWPQFNNG TWPAFCDQTN LFDISKVSDL VNKMEKKWTE
101: WGVWACPSNE TKLWEHEWNK HGTCVQSVFD QHSYFLTNLR FRQKLNLLNI LKQKGIKPDG GLYGLDEIKN AIKCAIGYAP GIECNEDVKG TKQLFQIYIC
201: LDNYAKEFVE CPYVPDKSCA SKIKFPKFPK KDSLGETLSV ISSV
101: WGVWACPSNE TKLWEHEWNK HGTCVQSVFD QHSYFLTNLR FRQKLNLLNI LKQKGIKPDG GLYGLDEIKN AIKCAIGYAP GIECNEDVKG TKQLFQIYIC
201: LDNYAKEFVE CPYVPDKSCA SKIKFPKFPK KDSLGETLSV ISSV
001: MRGIIIVSLL ILQSLVVSSS QTEPDFNFFY WVNYWPGAIC DSQKGCCPPT KGNTASDFII HGLWPQFNNG TWPAFCDQTN LFDISKISDL VCQMEKKWTE
101: WGVWACPSNE TNLWEHEWNK HGTCVQSIFD QHSYFRTNLK FKHKVHLLNI LIQKGIKPND GFYSLDEIKN AIKCAIGFAP GIECNEDVKG NKQLFQIYIC
201: LDNYAKEFVE CPYVPDKSCA SKIKFPSLPE RDSLNESLSV MSSVSTT
101: WGVWACPSNE TNLWEHEWNK HGTCVQSIFD QHSYFRTNLK FKHKVHLLNI LIQKGIKPND GFYSLDEIKN AIKCAIGFAP GIECNEDVKG NKQLFQIYIC
201: LDNYAKEFVE CPYVPDKSCA SKIKFPSLPE RDSLNESLSV MSSVSTT
Arabidopsis Description
Ribonuclease T2 family protein [Source:UniProtKB/TrEMBL;Acc:F4HUG9]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.