CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, extracellular, nucleus

Predictor Summary:

nucleus 2
peroxisome 1
mitochondrion 1
extracellular 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, nucleus, peroxisome
Any Predictor:	extracellular, nucleus, peroxisome
BaCelLo:	nucleus
MultiLoc:	peroxisome
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY33761	Canola	extracellular	29.53	83.26
CDY33762	Canola	peroxisome	27.81	82.03
CDX84041	Canola	extracellular	25.78	72.37
CDX96863	Canola	extracellular	25.78	72.37
AT1G14220.1	Thale cress	extracellular	24.69	69.3
CDY40267	Canola	extracellular	21.25	61.26
CDY20583	Canola	extracellular	21.09	60.81
KRH74871	Soybean	endoplasmic reticulum	21.41	60.62
KRH70737	Soybean	extracellular	21.09	59.73
GSMUA_Achr5P23330_001	Banana	extracellular	20.47	57.71
CDY45186	Canola	extracellular	20.0	55.9
GSMUA_Achr7P21030_001	Banana	extracellular	19.38	55.86
CDY03023	Canola	extracellular	19.84	55.46
CDY62181	Canola	extracellular	19.38	54.15
CDY09344	Canola	extracellular	19.38	53.45
GSMUA_Achr4P00460_001	Banana	endoplasmic reticulum, extracellular, plastid	19.53	47.35
Solyc05g007940.2.1	Tomato	extracellular	17.5	47.26
CDY33763	Canola	extracellular	15.31	40.16
CDX81620	Canola	extracellular	12.81	37.61
CDY60490	Canola	extracellular, plasma membrane, vacuole	12.5	31.25
CDY39709	Canola	extracellular	12.19	29.43

Protein Annotations

Gene3D:3.60.10.10	Gene3D:3.90.730.10	MapMan:35.1	GO:A0A078CWT5	EnsemblPlants:CDX81621	ProteinID:CDX81621
ProteinID:CDX81621.1	InterPro:Endo/exonu/phosph_ase_sf	GO:GO:0003674	GO:GO:0003676	GO:GO:0003723	GO:GO:0003824
GO:GO:0004518	GO:GO:0005488	GO:GO:0016787	GO:GO:0033897	EnsemblPlantsGene:GSBRNA2T00136532001	InterPro:IPR036430
InterPro:IPR036691	PFAM:PF00445	ScanProsite:PS00530	ScanProsite:PS00531	PANTHER:PTHR11240	PANTHER:PTHR11240:SF19
InterPro:RNase_T2-like	InterPro:RNase_T2-like_sf	InterPro:RNase_T2_His_AS_1	InterPro:RNase_T2_His_AS_2	InterPro:Ribonuclease_T2_eukaryotic	SUPFAM:SSF55895
SUPFAM:SSF56219	UniParc:UPI0004EDC449	:	:	:	:

Description

BnaC08g39800D

Coordinates

chrLK031826:-:41940..48267

Molecular Weight (calculated)

73373.2 Da

IEP (calculated)

6.468

GRAVY (calculated)

-0.537

Length

640 amino acids

Sequence
(BLAST)

001: MFGMETKNED EFIKLKLQSL HFIHYFSIPP IGLSGGLSLF WNDDTDITIL ESSPNLVDTR VVHKGVTTFV SFVYGAPATE DRTAYWQKLN TVGQGRDSPW
101: LLTGDFNDIL NNAEKVGGPV RFEGSFTAFR SFVAQNGLWD LKHTGEHLSW RGNRHTHFIR SRLDRSMGNC SWSESFPLGR CRYLRFEGSD HRPLLTYFNA
201: DRKRKRGVFR FNRSLTEQPE VTQLIDKTWH HSPLDSVIQK LNDVRRGIIE WSKDQQEQSN LSIKRNQETL EAALSCDTPD QNLIDEIKAS LRIAYLAEEQ
301: FWQQRSRIQW LKQGDRNTGF FHAATRTRRA INSIPVLEDA QGGAVYEEQD ITRVISNYFT QIFTTNGNDS FSQIQGLLRK KVSPDMNRML TAIPSDSEIR
401: EAVMSINGNK APGPDGFSAT FYQSYWHIVG ADVIRDVFSL HLFYFVLQWP GAYCDTKRAC CYPTSGKPAA DFGIHGLWPN YKDGSYPSNC DPDNEFDPSE
501: ISDLVSTLQT KWPTLSCPSN EGFKFWEHEW EKHGTCSESV MDQHKYFENT LALRDRVNLL QILTGAGIEP NDEFYKLKDI KKAIKEATGF TPVINCNKDP
601: EKNSQLHEIF FCVDTSGTEF IECPIIPRDR CPSHLQFAKF

Best Arabidopsis Sequence Match ( AT1G14220.1 )
(BLAST)

001: MGAKGCVNVL LKLLVFQGLF VSRPQEDFDF FYFVLQWPGA YCDTSRACCY PTSGKPAADF GIHGLWPNYN GGSWPSNCDP DSQFDRSQIS DLVSSLKKNW
101: PTLSCPSNEG FNFWEHEWEK HGTCSESVMD QHEYFENALK LKQKANLLQI LKNSGINPDD GFYNLDKITN AIKDGIGFTP GIECNKDPER NAQLHQIYIC
201: VDTSGTEFIE CPVLPRGSCP SQIQFSKF

Arabidopsis Description

F7A19.32 protein [Source:UniProtKB/TrEMBL;Acc:Q9XI64]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.