CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome

Predictor Summary:

nucleus 1
mitochondrion 2
peroxisome 2
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	peroxisome
Any Predictor:	cytosol, nucleus, peroxisome
BaCelLo:	nucleus
iPSORT:	mitochondrion
MultiLoc:	peroxisome
PProwler:	mitochondrion
WoLF PSORT:	peroxisome
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY33761	Canola	extracellular	74.65	71.37
CDX84041	Canola	extracellular	64.98	61.84
CDX96863	Canola	extracellular	64.98	61.84
AT1G14220.1	Thale cress	extracellular	64.06	60.96
CDY40267	Canola	extracellular	54.84	53.6
CDY20583	Canola	extracellular	54.38	53.15
GSMUA_Achr7P21030_001	Banana	extracellular	53.92	52.7
KRH74871	Soybean	endoplasmic reticulum	54.84	52.65
KRH70737	Soybean	extracellular	54.84	52.65
GSMUA_Achr5P23330_001	Banana	extracellular	53.46	51.1
CDY03023	Canola	extracellular	51.61	48.91
CDY45186	Canola	extracellular	51.61	48.91
CDY62181	Canola	extracellular	51.61	48.91
CDY09344	Canola	extracellular	51.61	48.28
Solyc05g007940.2.1	Tomato	extracellular	49.31	45.15
GSMUA_Achr4P00460_001	Banana	endoplasmic reticulum, extracellular, plastid	51.15	42.05
CDY33763	Canola	extracellular	42.86	38.11
CDX81620	Canola	extracellular	35.48	35.32
CDY60490	Canola	extracellular, plasma membrane, vacuole	35.48	30.08
CDY39709	Canola	extracellular	34.56	28.3
CDX81621	Canola	extracellular, nucleus, peroxisome	82.03	27.81

Protein Annotations

Gene3D:3.90.730.10	MapMan:35.1	GO:A0A078H8B5	UniProt:A0A078H8B5	EnsemblPlants:CDY33762	ProteinID:CDY33762
ProteinID:CDY33762.1	GO:GO:0003674	GO:GO:0003676	GO:GO:0003723	GO:GO:0003824	GO:GO:0004518
GO:GO:0005488	GO:GO:0006139	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016787
GO:GO:0033897	GO:GO:0090502	EnsemblPlantsGene:GSBRNA2T00055177001	InterPro:IPR036430	PFAM:PF00445	ScanProsite:PS00530
ScanProsite:PS00531	PANTHER:PTHR11240	PANTHER:PTHR11240:SF35	InterPro:RNase_T2-like	InterPro:RNase_T2-like_sf	InterPro:RNase_T2_His_AS_1
InterPro:RNase_T2_His_AS_2	InterPro:Ribonuclease_T2_eukaryotic	SUPFAM:SSF55895	UniParc:UPI0004EDDC2F	:	:

Description

BnaA09g45680DBnaA09g45680D protein [Source:UniProtKB/TrEMBL;Acc:A0A078H8B5]

Coordinates

chrLK032321:+:244793..247180

Molecular Weight (calculated)

25010.4 Da

IEP (calculated)

5.945

GRAVY (calculated)

-0.723

Length

217 amino acids

Sequence
(BLAST)

001: MKFYGTKYKT RSEYPNNLIQ NICMQWPGAY CDTKRACCYP TTGKPAADFG IHGLWPNYNN GSYPSNCDPS NEFDPSEISD LVSTLQTKWP TLSCPSNEGY
101: KFWEHEWEKH GTCSESVMDQ HGYFEKTLAL RDRINLLQIL TDAGIEPNDE FYKLKDIKKA IEKATGFTPV INCNRDPEKN RQLHEILLCV DKSGTEFMDC
201: PMPTDRCPYS HIQFAKF

Best Arabidopsis Sequence Match ( AT1G14210.1 )
(BLAST)

001: MRGIIIVSLL ILQSLVVSSS QTEPDFNFFY WVNYWPGAIC DSQKGCCPPT KGNTASDFII HGLWPQFNNG TWPAFCDQTN LFDISKISDL VCQMEKKWTE
101: WGVWACPSNE TNLWEHEWNK HGTCVQSIFD QHSYFRTNLK FKHKVHLLNI LIQKGIKPND GFYSLDEIKN AIKCAIGFAP GIECNEDVKG NKQLFQIYIC
201: LDNYAKEFVE CPYVPDKSCA SKIKFPSLPE RDSLNESLSV MSSVSTT

Arabidopsis Description

Ribonuclease T2 family protein [Source:UniProtKB/TrEMBL;Acc:F4HUG9]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.