Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- endoplasmic reticulum 5
- golgi 5
- extracellular 7
- vacuole 4
- plasma membrane 4
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX96863 | Canola | extracellular | 79.82 | 79.82 |
| CDX84041 | Canola | extracellular | 79.39 | 79.39 |
| CDY33761 | Canola | extracellular | 75.0 | 75.33 |
| Bra026846.1-P | Field mustard | extracellular | 74.56 | 74.89 |
| KRH74871 | Soybean | endoplasmic reticulum | 68.86 | 69.47 |
| KRH70737 | Soybean | extracellular | 67.54 | 68.14 |
| AT1G26820.1 | Thale cress | extracellular | 63.16 | 64.86 |
| CDY33762 | Canola | peroxisome | 60.96 | 64.06 |
| GSMUA_Achr5P23330_001 | Banana | extracellular | 60.53 | 60.79 |
| GSMUA_Achr7P21030_001 | Banana | extracellular | 58.77 | 60.36 |
| AT2G02990.1 | Thale cress | extracellular | 60.53 | 60.0 |
| Solyc05g007940.2.1 | Tomato | extracellular | 55.26 | 53.16 |
| AT1G14210.1 | Thale cress | extracellular | 52.63 | 48.58 |
| GSMUA_Achr4P00460_001 | Banana | endoplasmic reticulum, extracellular, plastid | 55.26 | 47.73 |
| AT2G39780.1 | Thale cress | extracellular | 35.96 | 31.66 |
| CDX81621 | Canola | extracellular, nucleus, peroxisome | 69.3 | 24.69 |
Protein Annotations
| Gene3D:3.90.730.10 | MapMan:35.1 | EntrezGene:837983 | UniProt:A0A178W938 | ProteinID:AAD39308.1 | ProteinID:AEE29124.1 |
| ArrayExpress:AT1G14220 | EnsemblPlantsGene:AT1G14220 | RefSeq:AT1G14220 | TAIR:AT1G14220 | RefSeq:AT1G14220-TAIR-G | EnsemblPlants:AT1G14220.1 |
| TAIR:AT1G14220.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003723 | GO:GO:0003824 | GO:GO:0004518 |
| GO:GO:0005488 | GO:GO:0006139 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016787 |
| GO:GO:0033897 | GO:GO:0090502 | InterPro:IPR036430 | RefSeq:NP_563941.1 | ProteinID:OAP14281.1 | PFAM:PF00445 |
| PO:PO:0000084 | PO:PO:0009005 | PO:PO:0020094 | ScanProsite:PS00530 | ScanProsite:PS00531 | PANTHER:PTHR11240 |
| PANTHER:PTHR11240:SF19 | UniProt:Q9XI64 | InterPro:RNase_T2-like | InterPro:RNase_T2-like_sf | InterPro:RNase_T2_His_AS_1 | InterPro:RNase_T2_His_AS_2 |
| InterPro:Ribonuclease_T2_eukaryotic | SUPFAM:SSF55895 | SignalP:SignalP-noTM | UniParc:UPI000004824B | SEG:seg | : |
Description
F7A19.32 protein [Source:UniProtKB/TrEMBL;Acc:Q9XI64]
Coordinates
chr1:-:4858450..4859661
Molecular Weight (calculated)
25690.1 Da
IEP (calculated)
4.889
GRAVY (calculated)
-0.421
Length
228 amino acids
Sequence
(BLAST)
(BLAST)
001: MGAKGCVNVL LKLLVFQGLF VSRPQEDFDF FYFVLQWPGA YCDTSRACCY PTSGKPAADF GIHGLWPNYN GGSWPSNCDP DSQFDRSQIS DLVSSLKKNW
101: PTLSCPSNEG FNFWEHEWEK HGTCSESVMD QHEYFENALK LKQKANLLQI LKNSGINPDD GFYNLDKITN AIKDGIGFTP GIECNKDPER NAQLHQIYIC
201: VDTSGTEFIE CPVLPRGSCP SQIQFSKF
101: PTLSCPSNEG FNFWEHEWEK HGTCSESVMD QHEYFENALK LKQKANLLQI LKNSGINPDD GFYNLDKITN AIKDGIGFTP GIECNKDPER NAQLHQIYIC
201: VDTSGTEFIE CPVLPRGSCP SQIQFSKF
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.