CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 6
endoplasmic reticulum 4
vacuole 4
plasma membrane 4
golgi 4
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	nucleus, secretory
BaCelLo:	secretory
iPSORT:	mitochondrion
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	nucleus
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra026846.1-P	Field mustard	extracellular	99.56	99.56
CDX96863	Canola	extracellular	75.77	75.44
AT1G14220.1	Thale cress	extracellular	75.33	75.0
CDX84041	Canola	extracellular	75.33	75.0
CDY33762	Canola	peroxisome	71.37	74.65
KRH74871	Soybean	endoplasmic reticulum	63.88	64.16
KRH70737	Soybean	extracellular	63.44	63.72
GSMUA_Achr7P21030_001	Banana	extracellular	59.47	60.81
CDY40267	Canola	extracellular	59.03	60.36
CDY20583	Canola	extracellular	58.59	59.91
GSMUA_Achr5P23330_001	Banana	extracellular	59.03	59.03
CDY45186	Canola	extracellular	56.83	56.33
CDY03023	Canola	extracellular	56.39	55.9
CDY62181	Canola	extracellular	55.51	55.02
CDY09344	Canola	extracellular	55.51	54.31
Solyc05g007940.2.1	Tomato	extracellular	52.86	50.63
GSMUA_Achr4P00460_001	Banana	endoplasmic reticulum, extracellular, plastid	55.07	47.35
CDY33763	Canola	extracellular	46.26	43.03
CDX81620	Canola	extracellular	38.77	40.37
CDY60490	Canola	extracellular, plasma membrane, vacuole	37.44	33.2
CDY39709	Canola	extracellular	36.56	31.32
CDX81621	Canola	extracellular, nucleus, peroxisome	83.26	29.53

Protein Annotations

Gene3D:3.90.730.10	MapMan:35.1	GO:A0A078H7B4	UniProt:A0A078H7B4	EnsemblPlants:CDY33761	ProteinID:CDY33761
ProteinID:CDY33761.1	GO:GO:0003674	GO:GO:0003676	GO:GO:0003723	GO:GO:0003824	GO:GO:0004518
GO:GO:0005488	GO:GO:0006139	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016787
GO:GO:0033897	GO:GO:0090502	EnsemblPlantsGene:GSBRNA2T00055176001	InterPro:IPR036430	PFAM:PF00445	ScanProsite:PS00530
ScanProsite:PS00531	PANTHER:PTHR11240	PANTHER:PTHR11240:SF19	InterPro:RNase_T2-like	InterPro:RNase_T2-like_sf	InterPro:RNase_T2_His_AS_1
InterPro:RNase_T2_His_AS_2	InterPro:Ribonuclease_T2_eukaryotic	SUPFAM:SSF55895	SignalP:SignalP-noTM	UniParc:UPI0004EECAF9	:

Description

BnaA09g45670DBnaA09g45670D protein [Source:UniProtKB/TrEMBL;Acc:A0A078H7B4]

Coordinates

chrLK032321:+:243431..244613

Molecular Weight (calculated)

25945.4 Da

IEP (calculated)

4.537

GRAVY (calculated)

-0.463

Length

227 amino acids

Sequence
(BLAST)

001: MGGKGWFLLK LLMFQGLFTS RLQDPGFDFF YFVLQWPGAY CDTKRACCYP TTGKPAADFG IHGLWPNYND GSYPSNCDPD SEFDPAEISD LVSTMQTKWP
101: TLSCPSNNGS KFWEHEWEKH GTCSESVMDQ HKYFENTLAL RDRVNLLQIL QDAGINPDDE FYDLQDIKNA IKDGTGFTPV IHCNKDPEKN SQLHEIFFCV
201: DTSGTEFIEC PIIPRDRCPS KLQFAMF

Best Arabidopsis Sequence Match ( AT1G14220.1 )
(BLAST)

001: MGAKGCVNVL LKLLVFQGLF VSRPQEDFDF FYFVLQWPGA YCDTSRACCY PTSGKPAADF GIHGLWPNYN GGSWPSNCDP DSQFDRSQIS DLVSSLKKNW
101: PTLSCPSNEG FNFWEHEWEK HGTCSESVMD QHEYFENALK LKQKANLLQI LKNSGINPDD GFYNLDKITN AIKDGIGFTP GIECNKDPER NAQLHQIYIC
201: VDTSGTEFIE CPVLPRGSCP SQIQFSKF

Arabidopsis Description

F7A19.32 protein [Source:UniProtKB/TrEMBL;Acc:Q9XI64]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.