Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 7
- endoplasmic reticulum 4
- vacuole 4
- plasma membrane 4
- golgi 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX84041 | Canola | extracellular | 98.68 | 98.68 |
| AT1G14220.1 | Thale cress | extracellular | 79.82 | 79.82 |
| CDY33761 | Canola | extracellular | 75.44 | 75.77 |
| CDY33762 | Canola | peroxisome | 61.84 | 64.98 |
| CDY40267 | Canola | extracellular | 63.16 | 64.86 |
| CDY20583 | Canola | extracellular | 63.16 | 64.86 |
| KRH70737 | Soybean | extracellular | 62.72 | 63.27 |
| KRH74871 | Soybean | endoplasmic reticulum | 62.72 | 63.27 |
| GSMUA_Achr7P21030_001 | Banana | extracellular | 57.46 | 59.01 |
| CDY45186 | Canola | extracellular | 58.77 | 58.52 |
| CDY62181 | Canola | extracellular | 58.33 | 58.08 |
| CDY03023 | Canola | extracellular | 57.89 | 57.64 |
| CDY09344 | Canola | extracellular | 58.33 | 57.33 |
| GSMUA_Achr5P23330_001 | Banana | extracellular | 57.02 | 57.27 |
| Solyc05g007940.2.1 | Tomato | extracellular | 53.07 | 51.05 |
| GSMUA_Achr4P00460_001 | Banana | endoplasmic reticulum, extracellular, plastid | 52.19 | 45.08 |
| CDY33763 | Canola | extracellular | 46.93 | 43.85 |
| CDX81620 | Canola | extracellular | 39.04 | 40.83 |
| CDY60490 | Canola | extracellular, plasma membrane, vacuole | 33.77 | 30.08 |
| CDY39709 | Canola | extracellular | 32.89 | 28.3 |
| CDX81621 | Canola | extracellular, nucleus, peroxisome | 72.37 | 25.78 |
Protein Annotations
| Gene3D:3.90.730.10 | MapMan:35.1 | GO:A0A078EBU9 | EnsemblPlants:CDX96863 | ProteinID:CDX96863 | ProteinID:CDX96863.1 |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003723 | GO:GO:0003824 | GO:GO:0004518 | GO:GO:0005488 |
| GO:GO:0016787 | GO:GO:0033897 | EnsemblPlantsGene:GSBRNA2T00103105001 | InterPro:IPR036430 | PFAM:PF00445 | ScanProsite:PS00530 |
| ScanProsite:PS00531 | PANTHER:PTHR11240 | PANTHER:PTHR11240:SF19 | InterPro:RNase_T2-like | InterPro:RNase_T2-like_sf | InterPro:RNase_T2_His_AS_1 |
| InterPro:RNase_T2_His_AS_2 | InterPro:Ribonuclease_T2_eukaryotic | SUPFAM:SSF55895 | SignalP:SignalP-noTM | UniParc:UPI0004EEE7DF | : |
Description
BnaA08g24060D
Coordinates
chrLK031895:+:1278389..1279372
Molecular Weight (calculated)
26434.2 Da
IEP (calculated)
6.240
GRAVY (calculated)
-0.618
Length
228 amino acids
Sequence
(BLAST)
(BLAST)
001: MGPKGWFILK LLMFQGLFIS HSQEQEDFDF FYLVLQWPGA YCDTKRSCCY PTSGKPAADF GIHGLWPNYK DGTYPSNCNP DSEFDKSQIT DLVSSLKKTW
101: PTLACPSNEG FKFWKHEWEK HGTCSESVMD QHEYFENSLK LRDRANLLQA LTNSGIKPDD RFYDLEKIRK AIKDEIGFTP GIECNKDPER NDQLHQIYIC
201: VDTSGTEFIK CPILPRERCP SRLQFAKF
101: PTLACPSNEG FKFWKHEWEK HGTCSESVMD QHEYFENSLK LRDRANLLQA LTNSGIKPDD RFYDLEKIRK AIKDEIGFTP GIECNKDPER NDQLHQIYIC
201: VDTSGTEFIK CPILPRERCP SRLQFAKF
001: MGAKGCVNVL LKLLVFQGLF VSRPQEDFDF FYFVLQWPGA YCDTSRACCY PTSGKPAADF GIHGLWPNYN GGSWPSNCDP DSQFDRSQIS DLVSSLKKNW
101: PTLSCPSNEG FNFWEHEWEK HGTCSESVMD QHEYFENALK LKQKANLLQI LKNSGINPDD GFYNLDKITN AIKDGIGFTP GIECNKDPER NAQLHQIYIC
201: VDTSGTEFIE CPVLPRGSCP SQIQFSKF
101: PTLSCPSNEG FNFWEHEWEK HGTCSESVMD QHEYFENALK LKQKANLLQI LKNSGINPDD GFYNLDKITN AIKDGIGFTP GIECNKDPER NAQLHQIYIC
201: VDTSGTEFIE CPVLPRGSCP SQIQFSKF
Arabidopsis Description
F7A19.32 protein [Source:UniProtKB/TrEMBL;Acc:Q9XI64]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.