Factsheet for Bra026846.1-P

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 7
endoplasmic reticulum 4
vacuole 5
plasma membrane 4
golgi 4
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	mitochondrion, nucleus, secretory
BaCelLo:	secretory
EpiLoc:	vacuole
iPSORT:	mitochondrion
MultiLoc:	extracellular
Plant-mPloc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	nucleus
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY33761	Canola	extracellular	99.56	99.56
AT1G14220.1	Thale cress	extracellular	74.89	74.56
KRH74871	Soybean	endoplasmic reticulum	63.88	64.16
KRH70737	Soybean	extracellular	63.44	63.72
GSMUA_Achr7P21030_001	Banana	extracellular	59.47	60.81
Bra012439.1-P	Field mustard	extracellular	59.03	60.36
GSMUA_Achr5P23330_001	Banana	extracellular	59.03	59.03
Bra024795.1-P	Field mustard	extracellular	56.83	56.33
Bra026570.1-P	Field mustard	extracellular	55.07	54.59
Solyc05g007940.2.1	Tomato	extracellular	52.86	50.63
GSMUA_Achr4P00460_001	Banana	endoplasmic reticulum, extracellular, plastid	55.07	47.35
Bra026847.1-P	Field mustard	extracellular	45.81	42.62
Bra032671.1-P	Field mustard	extracellular	36.56	31.32

Protein Annotations

Gene3D:3.90.730.10	MapMan:35.1	EnsemblPlantsGene:Bra026846	EnsemblPlants:Bra026846.1	EnsemblPlants:Bra026846.1-P	GO:GO:0003674
GO:GO:0003676	GO:GO:0003723	GO:GO:0003824	GO:GO:0004518	GO:GO:0005488	GO:GO:0006139
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016787	GO:GO:0033897	GO:GO:0090502
InterPro:IPR036430	UniProt:M4EDI6	PFAM:PF00445	ScanProsite:PS00530	ScanProsite:PS00531	PANTHER:PTHR11240
PANTHER:PTHR11240:SF19	InterPro:RNase_T2-like	InterPro:RNase_T2-like_sf	InterPro:RNase_T2_His_AS_1	InterPro:RNase_T2_His_AS_2	InterPro:Ribonuclease_T2_eukaryotic
SUPFAM:SSF55895	SignalP:SignalP-noTM	UniParc:UPI0002542E0C	:	:	:

Description

AT1G14220 (E=2e-105) | ribonuclease T2 family protein

Coordinates

chrA09:+:33969194..33970229

Molecular Weight (calculated)

25931.4 Da

IEP (calculated)

4.531

GRAVY (calculated)

-0.463

Length

227 amino acids

Sequence
(BLAST)

001: MGGKGWFLLK LLMFQGLFTS RLQDPGFDFF YFVLQWPGAY CDTKRACCYP TTGKPAADFG IHGLWPNYND GSYPSNCDPD SEFDPAEISD LVSTMQTKWP
101: TLSCPSNNGS KFWEHEWEKH GTCSESVMDQ HKYFENTLAL RDRVNLLQIL QDAGINPDDE FYDLQDIKNA IKDGTGFTPV IHCNKDPDKN SQLHEIFFCV
201: DTSGTEFIEC PIIPRDRCPS KLQFAMF

Best Arabidopsis Sequence Match ( AT1G14220.1 )
(BLAST)

001: MGAKGCVNVL LKLLVFQGLF VSRPQEDFDF FYFVLQWPGA YCDTSRACCY PTSGKPAADF GIHGLWPNYN GGSWPSNCDP DSQFDRSQIS DLVSSLKKNW
101: PTLSCPSNEG FNFWEHEWEK HGTCSESVMD QHEYFENALK LKQKANLLQI LKNSGINPDD GFYNLDKITN AIKDGIGFTP GIECNKDPER NAQLHQIYIC
201: VDTSGTEFIE CPVLPRGSCP SQIQFSKF

Arabidopsis Description

F7A19.32 protein [Source:UniProtKB/TrEMBL;Acc:Q9XI64]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.